X-Git-Url: http://source.jalview.org/gitweb/?p=jalview.git;a=blobdiff_plain;f=src%2Fjalview%2Fio%2Fpacked%2FParsePackedSet.java;fp=src%2Fjalview%2Fio%2Fpacked%2FParsePackedSet.java;h=fda4faa3e30a58abecd4b6f3abae18e14cc16697;hp=a4ef77e990e1ea6021dfc303bd3d38e37ccdb6da;hb=67b3acb8df1438ef37a756c04e14f5a3b8406808;hpb=aa91e8c4561c2dd0f18760e18fb0052979733bf8

diff --git a/src/jalview/io/packed/ParsePackedSet.java b/src/jalview/io/packed/ParsePackedSet.java
index a4ef77e..fda4faa 100644
--- a/src/jalview/io/packed/ParsePackedSet.java
+++ b/src/jalview/io/packed/ParsePackedSet.java
@@ -21,10 +21,13 @@
 package jalview.io.packed;
 
 import jalview.datamodel.AlignmentI;
+import jalview.io.AnnotationFile;
 import jalview.io.AppletFormatAdapter;
+import jalview.io.FeaturesFile;
 import jalview.io.FileParse;
 import jalview.io.FormatAdapter;
 import jalview.io.IdentifyFile;
+import jalview.io.NewickFile;
 import jalview.io.packed.DataProvider.JvDataType;
 
 import java.io.BufferedReader;
@@ -124,7 +127,7 @@ public class ParsePackedSet
             br = new BufferedReader(src.getReader());
           }
           // TODO: add columnSelection to context
-          if (new jalview.io.AnnotationFile().parseAnnotationFrom(
+          if (new AnnotationFile().parseAnnotationFrom(
                   context.getLastAlignment(), null, br))
           {
             context.updateSetModified(true);
@@ -161,7 +164,7 @@ public class ParsePackedSet
         }
         try
         {
-          jalview.io.FeaturesFile ff = new jalview.io.FeaturesFile(src);
+          FeaturesFile ff = new FeaturesFile(src);
           context.updateSetModified(ff.parse(context.getLastAlignment(),
                   context.featureColours, false, context.relaxedIdMatching));
         } catch (Exception e)
@@ -174,7 +177,7 @@ public class ParsePackedSet
       {
         try
         {
-          jalview.io.NewickFile nf = new jalview.io.NewickFile(src);
+          NewickFile nf = new NewickFile(src);
           if (!nf.isValid())
           {
             nf.close();