X-Git-Url: http://source.jalview.org/gitweb/?p=jalview.git;a=blobdiff_plain;f=src%2Fjalview%2Fviewmodel%2FAlignmentViewport.java;h=a53a68cf647528fe965bb05a13342d508d12dece;hp=4ea46564b52f93b78f243798ef3adf6026c2ed9d;hb=7d33612534e949fc19d00cd057fd8af9f7cd66eb;hpb=96f3f9ed47f4d7e5c094a49c5655fa946a186440

diff --git a/src/jalview/viewmodel/AlignmentViewport.java b/src/jalview/viewmodel/AlignmentViewport.java
index 4ea4656..a53a68c 100644
--- a/src/jalview/viewmodel/AlignmentViewport.java
+++ b/src/jalview/viewmodel/AlignmentViewport.java
@@ -1028,7 +1028,7 @@ public abstract class AlignmentViewport implements AlignViewportI
     // JBPNote: in applet, this method returned references to the alignment
     // sequences, and it did not honour the presence/absence of annotation
     // attached to the alignment (probably!)
-    if (selectionGroup == null)
+    if (selectionGroup == null || selectionGroup.getSize()==0)
     {
       sequences = alignment.getSequencesArray();
       AlignmentAnnotation[] annots = alignment.getAlignmentAnnotation();