X-Git-Url: http://source.jalview.org/gitweb/?p=jalview.git;a=blobdiff_plain;f=test%2Fjalview%2Fanalysis%2FFinderTest.java;h=764c56f7ee90e6709b5ede4827cb01f8eb061281;hp=95e6c0dc52643b19ccd11da66fea2048f61d5275;hb=7428d315297907b3bb52ddb099a348acffb87636;hpb=f7075b9f56eafbe634efadc1a0cafdab6698139a diff --git a/test/jalview/analysis/FinderTest.java b/test/jalview/analysis/FinderTest.java index 95e6c0d..764c56f 100644 --- a/test/jalview/analysis/FinderTest.java +++ b/test/jalview/analysis/FinderTest.java @@ -82,6 +82,16 @@ public class FinderTest DataSourceType.PASTE); av = af.getViewport(); al = av.getAlignment(); + + // JAL-3765 bug test data + String longSeqData = + ">O80429_MAIZE/2-140 Ferredoxin\n" + + "AAT---------ALSMSILR---APPPCFSSPLRLRV--AVAKPLA-APMRRQLLRAQATYNVKLITPEGEV\n" + + "ELQVPDDVYILDFAEEEGIDLPFSCRAGSCSSCAGKVVSGSVDQSDQSFLNDNQVADGWVLTCAAYPTSDVV\n" + + "IETHKEDDLL--\n" ; + af_oneseq=new FileLoader().LoadFileWaitTillLoaded(longSeqData, DataSourceType.PASTE); + av_oneseq = af_oneseq.getViewport(); + al_oneseq = av_oneseq.getAlignment(); } @AfterMethod(alwaysRun = true)