X-Git-Url: http://source.jalview.org/gitweb/?p=jalview.git;a=blobdiff_plain;f=test%2Fjalview%2Fanalysis%2FTestAlignSeq.java;fp=test%2Fjalview%2Fanalysis%2FTestAlignSeq.java;h=e2e559422e388bfecaf0c214b154a11752e9a873;hp=70e59c53bc8433e69f2d0bfabe7ff84199e4116a;hb=c0a03b2be5f8fd5cc6f4f2dbd856c5e82ba66289;hpb=68a89e0fafd92408be5aba40a9167934944b938d diff --git a/test/jalview/analysis/TestAlignSeq.java b/test/jalview/analysis/TestAlignSeq.java index 70e59c5..e2e5594 100644 --- a/test/jalview/analysis/TestAlignSeq.java +++ b/test/jalview/analysis/TestAlignSeq.java @@ -64,7 +64,7 @@ public class TestAlignSeq s2 = new Sequence("Seq2", "ASDFA"); s2.setStart(5); s2.setEnd(9); - s3 = new Sequence("Seq1", "SDFAQQQSSS"); + s3 = new Sequence("Seq3", "SDFAQQQSSS"); } @@ -125,10 +125,10 @@ public class TestAlignSeq }; as.printAlignment(ps); - String expected = "Score = 320.0\nLength of alignment = 10\nSequence Seq1 : 3 - 18 (Sequence length = 14)\nSequence Seq1 : 1 - 10 (Sequence length = 10)\n\n" - + "Seq1 SDFAQQQRRR\n" - + " ||||||| \n" - + "Seq1 SDFAQQQSSS\n\n" + "Percentage ID = 70.00\n"; + String expected = "Score = 320.0\nLength of alignment = 10\nSequence Seq1/4-13 (Sequence length = 14)\nSequence Seq3/1-10 (Sequence length = 10)\n\n" + + "Seq1/4-13 SDFAQQQRRR\n" + + " ||||||| \n" + + "Seq3/1-10 SDFAQQQSSS\n\n" + "Percentage ID = 70.00\n\n"; assertEquals(expected, baos.toString()); } }