source.jalview.org Git - jalview.git/commit

git://source.jalview.org / jalview.git / commit

author	gmungoc <g.m.carstairs@dundee.ac.uk>
	Sat, 7 Sep 2019 14:44:52 +0000 (15:44 +0100)
committer	gmungoc <g.m.carstairs@dundee.ac.uk>
	Sat, 7 Sep 2019 14:44:52 +0000 (15:44 +0100)
commit	08b87509ada06ac8614424247346daef4054b41a
tree	87b91107a41c96d9731dec872c6cff54b62a95f4	tree \| snapshot
parent	595a9e25db7f4f24c17de84656d7d5391a3d104d	commit \| diff

JAL-3397 impl.IntervalStore and nonc.IntervalStore unified api

39 files changed:

.classpath		diff \| blob \| history
lib/intervalstore-v1.0.jar	[deleted file]	blob \| history
lib/intervalstore-v1.1.jar	[new file with mode: 0644]	blob
src/intervalstore/api/IntervalI.java	[deleted file]	blob \| history
src/intervalstore/api/IntervalStoreI.java	[deleted file]	blob \| history
src/intervalstore/impl/BinarySearcher.java	[deleted file]	blob \| history
src/intervalstore/impl/IntervalStore.java	[deleted file]	blob \| history
src/intervalstore/impl/NCList.java	[deleted file]	blob \| history
src/intervalstore/impl/NCListBuilder.java	[deleted file]	blob \| history
src/intervalstore/impl/NCNode.java	[deleted file]	blob \| history
src/intervalstore/impl/Range.java	[deleted file]	blob \| history
src/intervalstore/nonc/IntervalEndSorter.java	[deleted file]	blob \| history
src/intervalstore/nonc/IntervalStore.java		diff \| blob \| history
src/intervalstore/nonc/IntervalStore0.java		diff \| blob \| history
src/jalview/api/AlignmentColsCollectionI.java		diff \| blob \| history
src/jalview/datamodel/Alignment.java		diff \| blob \| history
src/jalview/datamodel/AllColsCollection.java		diff \| blob \| history
src/jalview/datamodel/Sequence.java		diff \| blob \| history
src/jalview/datamodel/SequenceFeature.java		diff \| blob \| history
src/jalview/datamodel/SequenceI.java		diff \| blob \| history
src/jalview/datamodel/VisibleColsCollection.java		diff \| blob \| history
src/jalview/datamodel/features/FeatureStore.java		diff \| blob \| history
src/jalview/datamodel/features/FeatureStoreI.java	[deleted file]	blob \| history
src/jalview/datamodel/features/FeatureStoreImpl.java	[deleted file]	blob \| history
src/jalview/datamodel/features/FeatureStoreJS.java	[deleted file]	blob \| history
src/jalview/datamodel/features/SequenceFeatures.java		diff \| blob \| history
src/jalview/datamodel/features/SequenceFeaturesI.java		diff \| blob \| history
src/jalview/ext/ensembl/EnsemblFeatures.java		diff \| blob \| history
src/jalview/renderer/OverviewRenderer.java		diff \| blob \| history
src/jalview/renderer/OverviewResColourFinder.java		diff \| blob \| history
src/jalview/renderer/seqfeatures/FeatureColourFinder.java		diff \| blob \| history
src/jalview/renderer/seqfeatures/FeatureRenderer.java		diff \| blob \| history
test/intervalstore/nonc/IntervalStoreTest.java	[new file with mode: 0644]	blob
test/intervalstore/nonc/SimpleFeature.java	[moved from src/intervalstore/impl/SimpleFeature.java with 74% similarity]	diff \| blob \| history
test/jalview/datamodel/features/FeatureStoreJSTest.java		diff \| blob \| history
test/jalview/datamodel/features/FeatureStoreJavaTest.java		diff \| blob \| history
test/jalview/datamodel/features/FeatureStoreLinkedTest.java		diff \| blob \| history
test/jalview/datamodel/features/FeatureStoreNCListBufferTest.java		diff \| blob \| history
test/jalview/datamodel/features/SequenceFeaturesTest.java		diff \| blob \| history

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