tidy imports
authorjprocter <jprocter@compbio.dundee.ac.uk>
Thu, 8 Nov 2012 15:41:34 +0000 (15:41 +0000)
committerjprocter <jprocter@compbio.dundee.ac.uk>
Thu, 8 Nov 2012 15:41:34 +0000 (15:41 +0000)
commitad20cd92225f2ee8c251d39b00b90555d382a616
tree3cbbc161fe5e2cc7232828a80ce97c610f466e74
parentf6a7e5514230be7ea8c2d4cccb504b4ed95f80ef
tidy imports
111 files changed:
src/MCview/PDBViewer.java
src/jalview/analysis/Dna.java
src/jalview/analysis/Grouping.java
src/jalview/analysis/Rna.java
src/jalview/api/AlignViewportI.java
src/jalview/appletgui/AlignFrame.java
src/jalview/appletgui/AlignViewport.java
src/jalview/appletgui/AlignmentPanel.java
src/jalview/appletgui/AnnotationColourChooser.java
src/jalview/appletgui/AnnotationLabels.java
src/jalview/appletgui/AnnotationPanel.java
src/jalview/appletgui/AppletJmol.java
src/jalview/appletgui/EmbmenuFrame.java
src/jalview/appletgui/ExtJmol.java
src/jalview/appletgui/FeatureColourChooser.java
src/jalview/appletgui/FeatureRenderer.java
src/jalview/appletgui/PCAPanel.java
src/jalview/appletgui/SliderPanel.java
src/jalview/appletgui/TreePanel.java
src/jalview/bin/Jalview.java
src/jalview/bin/JalviewLiteURLRetrieve.java
src/jalview/datamodel/SeqCigar.java
src/jalview/datamodel/xdb/embl/EmblFeature.java
src/jalview/datamodel/xdb/embl/EmblFeatureLocations.java
src/jalview/ext/jmol/JmolCommands.java
src/jalview/ext/varna/JalviewVarnaBinding.java
src/jalview/ext/varna/VarnaCommands.java
src/jalview/gui/AlignmentPanel.java
src/jalview/gui/AppJmol.java
src/jalview/gui/AppJmolBinding.java
src/jalview/gui/AppVarna.java
src/jalview/gui/AppVarnaBinding.java
src/jalview/gui/AssociatePdbFileWithSeq.java
src/jalview/gui/CutAndPasteHtmlTransfer.java
src/jalview/gui/Desktop.java
src/jalview/gui/Finder.java
src/jalview/gui/Jalview2XML.java
src/jalview/gui/Jalview2XML_V1.java
src/jalview/gui/JvSwingUtils.java
src/jalview/gui/OptsParametersContainerI.java
src/jalview/gui/PCAPanel.java
src/jalview/gui/PopupMenu.java
src/jalview/gui/Preferences.java
src/jalview/gui/PromptUserConfig.java
src/jalview/gui/RedundancyPanel.java
src/jalview/gui/RestInputParamEditDialog.java
src/jalview/gui/TextColourChooser.java
src/jalview/gui/VamsasApplication.java
src/jalview/gui/WebserviceInfo.java
src/jalview/io/AlignmentProperties.java
src/jalview/io/IdentifyFile.java
src/jalview/io/MatrixFile.java
src/jalview/io/SimpleBlastFile.java
src/jalview/io/StockholmFile.java
src/jalview/io/TCoffeeScoreFile.java
src/jalview/io/vamsas/Datasetsequence.java
src/jalview/io/vamsas/DatastoreItem.java
src/jalview/io/vamsas/DatastoreRegistry.java
src/jalview/io/vamsas/Dbref.java
src/jalview/io/vamsas/Rangetype.java
src/jalview/io/vamsas/Sequencefeature.java
src/jalview/io/vamsas/Sequencemapping.java
src/jalview/javascript/JSFunctionExec.java
src/jalview/javascript/JsSelectionSender.java
src/jalview/javascript/MouseOverListener.java
src/jalview/jbgui/GRestServiceEditorPane.java
src/jalview/jbgui/GRnaStructureViewer.java
src/jalview/ws/DBRefFetcher.java
src/jalview/ws/EnfinEnvision2OneWay.java
src/jalview/ws/SequenceFetcher.java
src/jalview/ws/dbsources/EbiFileRetrievedProxy.java
src/jalview/ws/dbsources/EmblCdsSouce.java
src/jalview/ws/dbsources/EmblSource.java
src/jalview/ws/dbsources/EmblXmlSource.java
src/jalview/ws/dbsources/GeneDbSource.java
src/jalview/ws/dbsources/Pdb.java
src/jalview/ws/dbsources/Pfam.java
src/jalview/ws/dbsources/Uniprot.java
src/jalview/ws/dbsources/das/api/DasSourceRegistryI.java
src/jalview/ws/dbsources/das/datamodel/DasSequenceSource.java
src/jalview/ws/dbsources/das/datamodel/DasSourceRegistry.java
src/jalview/ws/dbsources/das/datamodel/JalviewSource.java
src/jalview/ws/jws1/JWS1Thread.java
src/jalview/ws/jws2/AAConClient.java
src/jalview/ws/jws2/AADisorderClient.java
src/jalview/ws/jws2/JabaParamStore.java
src/jalview/ws/jws2/MsaWSClient.java
src/jalview/ws/jws2/MsaWSThread.java
src/jalview/ws/jws2/ParameterUtils.java
src/jalview/ws/jws2/dm/AAConSettings.java
src/jalview/ws/jws2/dm/JabaParameter.java
src/jalview/ws/jws2/dm/JabaValueConstrain.java
src/jalview/ws/jws2/dm/JabaWsParamSet.java
src/jalview/ws/params/ParamManager.java
src/jalview/ws/params/ParameterI.java
src/jalview/ws/params/ValueConstrainI.java
src/jalview/ws/params/simple/IntegerParameter.java
src/jalview/ws/rest/HttpResultSet.java
src/jalview/ws/rest/InputType.java
src/jalview/ws/rest/RestClient.java
src/jalview/ws/rest/RestJob.java
src/jalview/ws/rest/RestJobThread.java
src/jalview/ws/rest/RestServiceDescription.java
src/jalview/ws/rest/params/Alignment.java
src/jalview/ws/rest/params/AnnotationFile.java
src/jalview/ws/rest/params/SeqGroupIndexVector.java
src/jalview/ws/rest/params/SeqIdVector.java
src/jalview/ws/rest/params/SeqVector.java
src/jalview/ws/rest/params/Tree.java
src/jalview/ws/seqfetcher/ASequenceFetcher.java
src/jalview/ws/seqfetcher/DbSourceProxyImpl.java