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JAL-2999 what's new and tweak release notes order
authorJim Procter <jprocter@issues.jalview.org>
Thu, 7 Jun 2018 15:05:22 +0000 (16:05 +0100)
committerJim Procter <jprocter@issues.jalview.org>
Thu, 7 Jun 2018 15:05:22 +0000 (16:05 +0100)
help/html/releases.html patch | blob | history
help/html/whatsNew.html patch | blob | history

diff --git a/help/html/releases.html b/help/html/releases.html
index 1352ee6..d176bfb 100755 (executable)
--- a/help/html/releases.html
+++ b/help/html/releases.html
@@ -78,13 +78,13 @@ li:before {
           <em></em>
           <ul>
             <li>
-              <!-- JAL-1460 -->Windows File Shortcuts can be dragged
-              onto the Jalview Desktop
-            </li>
-            <li>
               <!-- JAL-2920 -->Use HGVS nomenclature for variant
               annotation retrieved from Uniprot
             </li>
+            <li>
+              <!-- JAL-1460 -->Windows File Shortcuts can be dragged
+              onto the Jalview Desktop
+            </li>
           </ul>
         </div></td>
       <td><div align="left">
@@ -103,14 +103,14 @@ li:before {
               not alignment area in exported graphic
             </li>
             <li>
-              <!-- JAL-2992 -->Annotation panel set too high when
-              annotation added to view
-            </li>
-            <li>
               <!-- JAL-2993 -->F2/Keyboard mode edits work when Overview
               window has input focus
             </li>
             <li>
+              <!-- JAL-2992 -->Annotation panel set too high when
+              annotation added to view (Windows)
+            </li>
+            <li>
               <!-- JAL-1460 -->Drag URL from chrome, firefox, IE to
               Jalview desktop on Windows doesn't open file<br /> <em>Dragging
                 the currently open URL and links from a page viewed in
diff --git a/help/html/whatsNew.html b/help/html/whatsNew.html
index 0abd2a7..ed6f5c2 100755 (executable)
--- a/help/html/whatsNew.html
+++ b/help/html/whatsNew.html
@@ -24,11 +24,41 @@
 </head>
 <body>
   <p>
-    <strong>What's new in Jalview 2.10.4 ?</strong>
-  </p>
-  <p>
-    This is the May 2018 release of Jalview, and the last in the 2.10.x series. Jalview 2.10.4 includes:
+    <strong>What's new in Jalview 2.10.4b1 ?</strong>
   </p>
+  <p>This is the first patch release for Jalview 2.10.4. It includes
+    the following new patches:</p>
+  <ul>
+    <li>HGVS nomenclature used for variant annotation retrieved
+      from Uniprot</li>
+    <li>Uniprot import fails for some sequences (Cannot import
+      features with multiple variant elements)</li>
+    <li>Clustal files with sequence positions in right-hand column
+      are now parsed correctly</li>
+    <li>Wrap view - export to SVG - IDs shown but not alignment
+      area in exported graphic</li>
+    <li>F2/Keyboard mode edits work when Overview window has input
+      focus</li>
+    <li>Windows specific fixes:
+      <ul>
+        <li>Annotation panel set too high when annotation added to
+          view</li>
+        <li>Updated search paths for Chimera default installation</li>
+        <li>Windows File Shortcuts can be dragged onto the Jalview
+          Desktop</li>
+        <li>Drag URL from Chrome, Firefox, IE to Jalview desktop on
+          Windows doesn't open file:<br /> Dragging the currently open
+          URL and links from a page viewed in Firefox or Chrome on
+          Windows is now fully supported.<br />
+        <strong>If you are using Edge</strong>, only links in the page
+          can be dragged.<br />
+        <strong>With Internet Explorer</strong>, only the currently open
+          URL in the browser can be dropped onto Jalview.
+        </li>
+      </ul>
+    </li>
+  </ul>
+  <p>Highlights in the 2.10.4 series include:</p>
   <ul>
     <li>Numerous efficiency improvements in the renderer and overview when working with large alignments with lots of hidden columns</li>
     <li>Use of HTTPS when connecting to Uniprot, Ensembl and other EBI web services</li>