From: amwaterhouse <Andrew Waterhouse>
Date: Thu, 9 Nov 2006 18:10:26 +0000 (+0000)
Subject: 1.1 compatible
X-Git-Tag: Release_2_2~157
X-Git-Url: http://source.jalview.org/gitweb/?p=jalview.git;a=commitdiff_plain;h=083196ff5de0d570ee70420a15aa6ff1c2dd03bf

1.1 compatible
---

diff --git a/src/jalview/analysis/AlignmentSorter.java b/src/jalview/analysis/AlignmentSorter.java
index c80c326..bf18b70 100755
--- a/src/jalview/analysis/AlignmentSorter.java
+++ b/src/jalview/analysis/AlignmentSorter.java
@@ -121,7 +121,7 @@ public class AlignmentSorter
             tmp.addElement(seqs[i]);
         }
 
-        algn.clear();
+        algn.removeAllElements();
         //User may have hidden seqs, then clicked undo or redo
         for (int i = 0; i < tmp.size(); i++)
         {