From: James Procter <j.procter@dundee.ac.uk>
Date: Wed, 15 Nov 2023 15:02:43 +0000 (+0000)
Subject: JAL-4222 bail if we wait too long for Jmol to save an image
X-Git-Tag: Release_2_11_3_0^2~2^2
X-Git-Url: http://source.jalview.org/gitweb/?p=jalview.git;a=commitdiff_plain;h=0b2df62f9d5ffe2b2fbfd3652a257f4234a9bf9f

JAL-4222 bail if we wait too long for Jmol to save an image
---

diff --git a/src/jalview/gui/AppJmol.java b/src/jalview/gui/AppJmol.java
index ba4eb9c..0aa4878 100644
--- a/src/jalview/gui/AppJmol.java
+++ b/src/jalview/gui/AppJmol.java
@@ -503,10 +503,17 @@ public class AppJmol extends StructureViewerBase
                 }
               });
       runner.start();
+      long time = 0;
       do
       {
         Thread.sleep(25);
-      } while (runner.isAlive());
+      } while (runner.isAlive() && time++ < 4000);
+      if (time >= 4000)
+      {
+        runner.interrupt();
+        throw new ImageOutputException(
+                "Jmol took too long to export. Waited for 100 seconds.");
+      }
     } catch (Throwable e)
     {
       throw new ImageOutputException(