From 07df1587079d0e87b9913464e453cd585cf4b0f1 Mon Sep 17 00:00:00 2001
From: Ben Soares <bsoares@dundee.ac.uk>
Date: Thu, 25 Apr 2019 01:04:01 +0100
Subject: [PATCH] JAL-3224 Tidied up Network installers in install4j template.
 Moved getdown-launcher.jar into dist (needed by Jalview
 anyway)

---
 build.gradle                                 |   24 ++----
 utils/install4j/install4j_template.install4j |  113 +++++++++++++++-----------
 2 files changed, 75 insertions(+), 62 deletions(-)

diff --git a/build.gradle b/build.gradle
index adaf54d..0716ae9 100644
--- a/build.gradle
+++ b/build.gradle
@@ -53,7 +53,7 @@ ext {
   getdownJ11libDir = getdownWebsiteDir + '/' + getdown_j11lib_dir
   getdownResourceDir = getdownWebsiteDir + '/' + getdown_resource_dir
   getdownLauncher = jalviewDir + '/' + getdown_launcher
-  getdownFilesDir = jalviewDir + '/' + getdown_files_dir
+  getdownFilesDir = jalviewDir + '/' + getdown_files_dir + '/' + JAVA_VERSION + '/'
   getdownLib1 = jalviewDir + '/' + getdown_lib1
   def getdownChannel = getdown_channel_name
   if (getdown_channel_name.equals("COMMIT")) {
@@ -700,6 +700,8 @@ task getdownWebsite() {
       }
     }
 
+    // NOT USING MODULES YET, EVERYTHING SHOULD BE IN dist
+    /*
     if (JAVA_VERSION.equals("11")) {
       def j11libFiles = fileTree(dir: "$jalviewDir/$j11libDir", include: ["*.jar"]).getFiles()
       j11libFiles.sort().each{f ->
@@ -711,8 +713,10 @@ task getdownWebsite() {
         }
       }
     }
+    */
 
-    getdownTextString += "code = " + file(getdownLauncher).getName() + "\n"
+    //moved getdown_launcher into dist
+    //getdownTextString += "code = " + packageDir + '/' + file(getdownLauncher).getName() + "\n"
     getdownTextString += "class = " + mainClass + "\n"
 
     def getdown_txt = file(project.ext.getdownWebsiteDir + "/getdown.txt")
@@ -725,22 +729,12 @@ task getdownWebsite() {
 
     copy {
       from getdownLauncher
-      into project.ext.getdownWebsiteDir
-    }
-
-    copy {
-      from getdownLauncher
-      into project.ext.getdownFilesDir
-    }
-
-    copy {
-      from getdownLib1
-      into project.ext.getdownFilesDir
+      into project.ext.getdownFilesDir + '/' + packageDir
     }
 
     copy {
       from getdownLib1
-      into project.ext.getdownWebsiteDir
+      into project.ext.getdownFilesDir + '/' + packageDir
     }
 
     copy {
@@ -811,7 +805,7 @@ task copyInstall4jTemplate(type: Copy) {
     include install4jTemplate
     rename (install4jTemplate, install4jConfFile)
     filter(ReplaceTokens, beginToken: '', endToken: '', tokens: ['9999999999': JAVA_VERSION])
-    filter(ReplaceTokens, beginToken: '$$', endToken: '$$', tokens: ['VERSION': JALVIEW_VERSION, 'MACOS_JAVA_VM_DIR': macosJavaVMDir, 'WINDOWS_JAVA_VM_DIR': windowsJavaVMDir])
+    filter(ReplaceTokens, beginToken: '$$', endToken: '$$', tokens: ['JAVA_VERSION': JAVA_VERSION, 'VERSION': JALVIEW_VERSION, 'MACOS_JAVA_VM_DIR': macosJavaVMDir, 'WINDOWS_JAVA_VM_DIR': windowsJavaVMDir])
   }
   into install4jDir
   inputs.files("$install4jDir/$install4jTemplate")
diff --git a/utils/install4j/install4j_template.install4j b/utils/install4j/install4j_template.install4j
index fe1b24d..a006a23 100644
--- a/utils/install4j/install4j_template.install4j
+++ b/utils/install4j/install4j_template.install4j
@@ -34,10 +34,10 @@
       <mountPoint id="885" root="883" location="" mode="755" />
     </mountPoints>
     <entries>
-      <dirEntry mountPoint="454" file="../../getdown/files" overwriteMode="4" shared="false" fileMode="644" uninstallMode="0" overrideFileMode="false" overrideOverwriteMode="true" overrideUninstallMode="true" entryMode="direct" subDirectory="files" excludeSuffixes="" dirMode="755" overrideDirMode="false">
+      <dirEntry mountPoint="454" file="../../getdown/files/$$JAVA_VERSION$$" overwriteMode="4" shared="false" fileMode="644" uninstallMode="0" overrideFileMode="false" overrideOverwriteMode="true" overrideUninstallMode="true" entryMode="direct" subDirectory="files" excludeSuffixes="" dirMode="755" overrideDirMode="false">
         <exclude />
       </dirEntry>
-      <dirEntry mountPoint="736" file="../../getdown/website" overwriteMode="4" shared="false" fileMode="644" uninstallMode="0" overrideFileMode="false" overrideOverwriteMode="true" overrideUninstallMode="true" entryMode="direct" subDirectory="files" excludeSuffixes="" dirMode="755" overrideDirMode="false">
+      <dirEntry mountPoint="736" file="../../getdown/website/$$JAVA_VERSION$$" overwriteMode="4" shared="false" fileMode="644" uninstallMode="0" overrideFileMode="false" overrideOverwriteMode="true" overrideUninstallMode="true" entryMode="direct" subDirectory="files" excludeSuffixes="" dirMode="755" overrideDirMode="false">
         <exclude />
       </dirEntry>
       <dirEntry mountPoint="884" file="$$MACOS_JAVA_VM_DIR$$" overwriteMode="4" shared="false" fileMode="755" uninstallMode="0" overrideFileMode="true" overrideOverwriteMode="false" overrideUninstallMode="true" entryMode="subdir" subDirectory="java_vm" excludeSuffixes="" dirMode="755" overrideDirMode="false">
@@ -69,44 +69,17 @@
         </include>
         <dependencies />
       </component>
+      <component name="getdown" id="1276" customizedId="" displayDescription="false" hideHelpButton="false" selected="true" changeable="true" downloadable="false" hidden="false">
+        <description />
+        <include all="false">
+          <entry location=".i4j_fileset_" fileType="regular" />
+        </include>
+        <dependencies />
+      </component>
     </components>
   </files>
   <launchers>
-    <launcher name="Jalview Launcher" id="121" customizedId="" external="false" excludeFromMenu="false" unixMode="755" unixAutoStart="true" menuName="${compiler:sys.shortName}-${compiler:sys.version}" icnsFile="../../resources/images/jalview_logos.icns" customMacBundleIdentifier="false" macBundleIdentifier="" swtApp="false" fileset="734" macBundleBinary="JavaApplicationStub" addMacEntitlements="false" macEntitlementsFile="" useCustomMacosExecutableName="true" customMacosExecutableName="${compiler:sys.shortName}" useJavaMinVersionOverride="false" javaMinVersionOverride="" useJavaMaxVersionOverride="false" javaMaxVersionOverride="" checkUpdater="false" updateExecutionMode="unattendedProgress" unattendedUpdateTitle="${i18n:updater.WindowTitle(&quot;${compiler:sys.fullName}&quot;)}">
-      <executable name="Jalview" type="1" iconSet="true" iconFile="../../resources/images/jalview_logos.ico" executableDir="." redirectStderr="true" stderrFile="error.log" stderrMode="overwrite" redirectStdout="true" stdoutFile="output.log" stdoutMode="overwrite" failOnStderrOutput="true" executableMode="1" changeWorkingDirectory="true" workingDirectory="." singleInstance="true" serviceStartType="2" serviceDependencies="" serviceDescription="" jreLocation="" executionLevel="asInvoker" checkConsoleParameter="true" globalSingleInstance="false" singleInstanceActivate="true" dpiAware="java9+">
-        <versionInfo include="false" fileVersion="" fileDescription="" legalCopyright="" internalName="" productName="" />
-      </executable>
-      <splashScreen show="false" width="640" height="480" bitmapFile="../../resources/images/jalview_logo_background_fade-640x480.png" textOverlay="true">
-        <text>
-          <statusLine x="85" y="81" text="${compiler:sys.shortName}" fontSize="18" fontColor="0,0,0" bold="false" />
-          <versionLine x="85" y="109" text="version ${compiler:sys.version}" fontSize="8" fontColor="0,0,0" bold="false" />
-        </text>
-      </splashScreen>
-      <java mainClass="com.threerings.getdown.launcher.GetdownApp" mainMode="1" vmParameters="" arguments="." allowVMPassthroughParameters="true" preferredVM="" bundleRuntime="true">
-        <classPath>
-          <archive location="getdown-launcher.jar" failOnError="false" />
-          <archive location="commons-compress-1.18.jar" failOnError="false" />
-        </classPath>
-        <modulePath />
-        <nativeLibraryDirectories />
-        <vmOptions />
-      </java>
-      <includedFiles />
-      <unextractableFiles />
-      <vmOptionsFile mode="template" overwriteMode="0" fileMode="644">
-        <content />
-      </vmOptionsFile>
-      <customScript mode="1" file="">
-        <content />
-      </customScript>
-      <infoPlist mode="1" file="">
-        <content />
-      </infoPlist>
-      <iconImageFiles>
-        <file path="../../resources/images/Jalview_Logo.png" />
-      </iconImageFiles>
-    </launcher>
-    <launcher name="MacOS Offline Jalview Launcher" id="737" customizedId="" external="false" excludeFromMenu="false" unixMode="755" unixAutoStart="true" menuName="${compiler:sys.shortName}-${compiler:sys.version}" icnsFile="../../resources/images/jalview_logos.icns" customMacBundleIdentifier="false" macBundleIdentifier="" swtApp="false" fileset="1015" macBundleBinary="JavaApplicationStub" addMacEntitlements="false" macEntitlementsFile="" useCustomMacosExecutableName="true" customMacosExecutableName="${compiler:sys.shortName}" useJavaMinVersionOverride="false" javaMinVersionOverride="" useJavaMaxVersionOverride="false" javaMaxVersionOverride="" checkUpdater="false" updateExecutionMode="unattendedProgress" unattendedUpdateTitle="${i18n:updater.WindowTitle(&quot;${compiler:sys.fullName}&quot;)}">
+    <launcher name="Offline Jalview Launcher" id="737" customizedId="" external="false" excludeFromMenu="false" unixMode="755" unixAutoStart="true" menuName="${compiler:sys.shortName}-${compiler:sys.version}" icnsFile="../../resources/images/jalview_logos.icns" customMacBundleIdentifier="false" macBundleIdentifier="" swtApp="false" fileset="734" macBundleBinary="JavaApplicationStub" addMacEntitlements="false" macEntitlementsFile="" useCustomMacosExecutableName="true" customMacosExecutableName="${compiler:sys.shortName}" useJavaMinVersionOverride="false" javaMinVersionOverride="" useJavaMaxVersionOverride="false" javaMaxVersionOverride="" checkUpdater="false" updateExecutionMode="unattendedProgress" unattendedUpdateTitle="${i18n:updater.WindowTitle(&quot;${compiler:sys.fullName}&quot;)}">
       <executable name="Jalview" type="1" iconSet="true" iconFile="../../resources/images/jalview_logos.ico" executableDir="." redirectStderr="true" stderrFile="error.log" stderrMode="overwrite" redirectStdout="true" stdoutFile="output.log" stdoutMode="overwrite" failOnStderrOutput="true" executableMode="1" changeWorkingDirectory="true" workingDirectory="." singleInstance="true" serviceStartType="2" serviceDependencies="" serviceDescription="" jreLocation="" executionLevel="asInvoker" checkConsoleParameter="true" globalSingleInstance="false" singleInstanceActivate="true" dpiAware="java9+">
         <versionInfo include="false" fileVersion="" fileDescription="" legalCopyright="" internalName="" productName="" />
       </executable>
@@ -140,7 +113,7 @@
         <file path="../../resources/images/Jalview_Logo.png" />
       </iconImageFiles>
     </launcher>
-    <launcher name="Windows Offline Jalview Launcher" id="1022" customizedId="" external="false" excludeFromMenu="false" unixMode="755" unixAutoStart="true" menuName="${compiler:sys.shortName}-${compiler:sys.version}" icnsFile="../../resources/images/jalview_logos.icns" customMacBundleIdentifier="false" macBundleIdentifier="" swtApp="false" fileset="1017" macBundleBinary="JavaApplicationStub" addMacEntitlements="false" macEntitlementsFile="" useCustomMacosExecutableName="true" customMacosExecutableName="${compiler:sys.shortName}" useJavaMinVersionOverride="false" javaMinVersionOverride="" useJavaMaxVersionOverride="false" javaMaxVersionOverride="" checkUpdater="false" updateExecutionMode="unattendedProgress" unattendedUpdateTitle="${i18n:updater.WindowTitle(&quot;${compiler:sys.fullName}&quot;)}">
+    <launcher name="Network Jalview Launcher" id="1402" customizedId="" external="false" excludeFromMenu="false" unixMode="755" unixAutoStart="true" menuName="${compiler:sys.shortName}-${compiler:sys.version}" icnsFile="../../resources/images/jalview_logos.icns" customMacBundleIdentifier="false" macBundleIdentifier="" swtApp="false" fileset="" macBundleBinary="JavaApplicationStub" addMacEntitlements="false" macEntitlementsFile="" useCustomMacosExecutableName="true" customMacosExecutableName="${compiler:sys.shortName}" useJavaMinVersionOverride="false" javaMinVersionOverride="" useJavaMaxVersionOverride="false" javaMaxVersionOverride="" checkUpdater="false" updateExecutionMode="unattendedProgress" unattendedUpdateTitle="${i18n:updater.WindowTitle(&quot;${compiler:sys.fullName}&quot;)}">
       <executable name="Jalview" type="1" iconSet="true" iconFile="../../resources/images/jalview_logos.ico" executableDir="." redirectStderr="true" stderrFile="error.log" stderrMode="overwrite" redirectStdout="true" stdoutFile="output.log" stdoutMode="overwrite" failOnStderrOutput="true" executableMode="1" changeWorkingDirectory="true" workingDirectory="." singleInstance="true" serviceStartType="2" serviceDependencies="" serviceDescription="" jreLocation="" executionLevel="asInvoker" checkConsoleParameter="true" globalSingleInstance="false" singleInstanceActivate="true" dpiAware="java9+">
         <versionInfo include="false" fileVersion="" fileDescription="" legalCopyright="" internalName="" productName="" />
       </executable>
@@ -1535,12 +1508,11 @@ return console.askYesNo(message, true);
       <excludedComponents>
         <component id="1155" />
         <component id="1156" />
+        <component id="1276" />
       </excludedComponents>
       <includedDownloadableComponents />
       <excludedLaunchers>
-        <launcher id="121" />
-        <launcher id="737" />
-        <launcher id="1022" />
+        <launcher id="1402" />
       </excludedLaunchers>
       <excludedBeans />
       <overriddenPrincipalLanguage id="en" customLocalizationFile="" />
@@ -1571,12 +1543,11 @@ return console.askYesNo(message, true);
       <excludedComponents>
         <component id="1155" />
         <component id="1156" />
+        <component id="1276" />
       </excludedComponents>
       <includedDownloadableComponents />
       <excludedLaunchers>
-        <launcher id="121" />
-        <launcher id="737" />
-        <launcher id="1022" />
+        <launcher id="1402" />
       </excludedLaunchers>
       <excludedBeans />
       <overriddenPrincipalLanguage id="en" customLocalizationFile="" />
@@ -1606,11 +1577,11 @@ return console.askYesNo(message, true);
     <windows name="Offline Windows" id="743" customizedId="" mediaFileName="${compiler:sys.shortName}-OFFLINE_${compiler:sys.platform}_${compiler:sys.version}" installDir="${compiler:sys.shortName}" overridePrincipalLanguage="false" jreBitType="64" runPostProcessor="false" postProcessor="" failOnPostProcessorError="false" useLegacyMediaFileIds="false" legacyMediaFileIds="" downloadURL="" includeAllDownloadableComponents="false" includedJRE="" manualJREEntry="false" bundleType="1" jreURL="" jreShared="false" directDownload="false" installOnlyIfNecessary="false" customInstallBaseDir="" contentFilesType="1" verifyIntegrity="true">
       <excludedComponents>
         <component id="1155" />
+        <component id="1276" />
       </excludedComponents>
       <includedDownloadableComponents />
       <excludedLaunchers>
-        <launcher id="121" />
-        <launcher id="737" />
+        <launcher id="1402" />
       </excludedLaunchers>
       <excludedBeans />
       <overriddenPrincipalLanguage id="en" customLocalizationFile="" />
@@ -1627,6 +1598,7 @@ return console.askYesNo(message, true);
     <macosArchive name="Offline macOS Single Bundle Archive" id="878" customizedId="" mediaFileName="${compiler:sys.shortName}-OFFLINE_${compiler:sys.platform}-app_${compiler:sys.version}" installDir="${compiler:sys.shortName}" overridePrincipalLanguage="false" jreBitType="all" runPostProcessor="false" postProcessor="" failOnPostProcessorError="false" useLegacyMediaFileIds="false" legacyMediaFileIds="" downloadURL="" includeAllDownloadableComponents="true" includedJRE="" manualJREEntry="false" archiveType="dmg" volumeName="${compiler:sys.shortName} Installer" launcherId="737">
       <excludedComponents>
         <component id="1156" />
+        <component id="1276" />
       </excludedComponents>
       <includedDownloadableComponents />
       <excludedBeans />
@@ -1647,12 +1619,59 @@ return console.askYesNo(message, true);
         <symlink name="Jalview.app/Contents/Resources/app/java_vm/Contents/MacOS/libjli.dylib" target="../Home/lib/jli/libjli.dylib" />
       </topLevelFiles>
     </macosArchive>
+    <windows name="Network Windows" id="1272" customizedId="" mediaFileName="${compiler:sys.shortName}-NETWORK_${compiler:sys.platform}_${compiler:sys.version}" installDir="${compiler:sys.shortName}" overridePrincipalLanguage="false" jreBitType="64" runPostProcessor="false" postProcessor="" failOnPostProcessorError="false" useLegacyMediaFileIds="false" legacyMediaFileIds="" downloadURL="" includeAllDownloadableComponents="false" includedJRE="" manualJREEntry="false" bundleType="1" jreURL="" jreShared="false" directDownload="false" installOnlyIfNecessary="false" customInstallBaseDir="" contentFilesType="1" verifyIntegrity="true">
+      <excludedComponents>
+        <component id="1031" />
+        <component id="1155" />
+      </excludedComponents>
+      <includedDownloadableComponents />
+      <excludedLaunchers>
+        <launcher id="737" />
+      </excludedLaunchers>
+      <excludedBeans />
+      <overriddenPrincipalLanguage id="en" customLocalizationFile="" />
+      <exclude>
+        <entry location=".i4j_fileset_734" fileType="regular" />
+        <entry location=".i4j_fileset_880" fileType="regular" />
+      </exclude>
+      <variables />
+      <autoUpdate useMinUpdatableVersion="false" minUpdatableVersion="" useMaxUpdatableVersion="false" maxUpdatableVersion="">
+        <commentFiles />
+        <customAttributes />
+      </autoUpdate>
+    </windows>
+    <macosArchive name="Network macOS Single Bundle Archive" id="1274" customizedId="" mediaFileName="${compiler:sys.shortName}-NETWORK_${compiler:sys.platform}-app_${compiler:sys.version}" installDir="${compiler:sys.shortName}" overridePrincipalLanguage="false" jreBitType="all" runPostProcessor="false" postProcessor="" failOnPostProcessorError="false" useLegacyMediaFileIds="false" legacyMediaFileIds="" downloadURL="" includeAllDownloadableComponents="true" includedJRE="" manualJREEntry="false" archiveType="dmg" volumeName="${compiler:sys.shortName} Installer" launcherId="1402">
+      <excludedComponents>
+        <component id="1031" />
+        <component id="1156" />
+      </excludedComponents>
+      <includedDownloadableComponents />
+      <excludedBeans />
+      <overriddenPrincipalLanguage id="en" customLocalizationFile="" />
+      <exclude>
+        <entry location=".i4j_fileset_734" fileType="regular" />
+        <entry location=".i4j_fileset_882" fileType="regular" />
+      </exclude>
+      <variables />
+      <autoUpdate useMinUpdatableVersion="false" minUpdatableVersion="" useMaxUpdatableVersion="false" maxUpdatableVersion="">
+        <commentFiles />
+        <customAttributes />
+      </autoUpdate>
+      <topLevelFiles>
+        <symlink name="&quot; &quot;" target="/Applications" />
+        <file name=".background/jalview_dmg_background.png" file="./jalview_dmg_background.png" />
+        <file name=".DS_Store" file="./DS_Store" />
+        <symlink name="Jalview.app/Contents/Resources/app/java_vm/Contents/MacOS/libjli.dylib" target="../Home/lib/jli/libjli.dylib" />
+      </topLevelFiles>
+    </macosArchive>
   </mediaSets>
   <buildIds buildAll="false">
     <mediaSet refId="153" />
     <mediaSet refId="570" />
     <mediaSet refId="743" />
     <mediaSet refId="878" />
+    <mediaSet refId="1272" />
+    <mediaSet refId="1274" />
   </buildIds>
-  <buildOptions verbose="true" faster="true" disableSigning="true" disableJreBundling="true" debug="false" />
+  <buildOptions verbose="false" faster="false" disableSigning="true" disableJreBundling="true" debug="false" />
 </install4j>
-- 
1.7.10.2