From 43d97319aebb52a38c58fe201198f593d312b940 Mon Sep 17 00:00:00 2001 From: Jim Procter Date: Sat, 29 Oct 2022 12:20:09 +0100 Subject: [PATCH] JAL-4090 bump version and set up release notes for 2.11.3 --- .settings/org.eclipse.buildship.core.prefs | 11 +++++++++++ RELEASE | 2 +- help/markdown/releases/release-2_11_3.md | 24 ++++++++++++++++++++++++ 3 files changed, 36 insertions(+), 1 deletion(-) create mode 100644 help/markdown/releases/release-2_11_3.md diff --git a/.settings/org.eclipse.buildship.core.prefs b/.settings/org.eclipse.buildship.core.prefs index e889521..e479558 100644 --- a/.settings/org.eclipse.buildship.core.prefs +++ b/.settings/org.eclipse.buildship.core.prefs @@ -1,2 +1,13 @@ +arguments= +auto.sync=false +build.scans.enabled=false +connection.gradle.distribution=GRADLE_DISTRIBUTION(WRAPPER) connection.project.dir= eclipse.preferences.version=1 +gradle.user.home= +java.home= +jvm.arguments= +offline.mode=false +override.workspace.settings=false +show.console.view=false +show.executions.view=false diff --git a/RELEASE b/RELEASE index 5bcf6d0..c29f144 100644 --- a/RELEASE +++ b/RELEASE @@ -1,2 +1,2 @@ jalview.release=releases/Release_2_11_2_Branch -jalview.version=2.11.2.5 +jalview.version=2.11.3 diff --git a/help/markdown/releases/release-2_11_3.md b/help/markdown/releases/release-2_11_3.md new file mode 100644 index 0000000..18b15ea --- /dev/null +++ b/help/markdown/releases/release-2_11_3.md @@ -0,0 +1,24 @@ +--- +version: 2.11.3 +date: 2022-12-12 +channel: "release" +--- + +## New Features + +- Find can search sequence features' type and description +- Hold down Shift + CMD/CTRL C to copy highlighted regions as new sequences +JAL-4089 use selected columns for superposition +JAL-4086 Highlight aligned positions on all associated structures when mousing over a column +JAL-4083 Exceptions for multiple residue highlights in Jmol +JAL-4075 Don't add string label version of DSSP secondary structure codes in secondary structure annotation rows +JAL-4033 selections with visual feedback via contact matrix annotation +JAL-4027 contact matrix datatype in Jalview +JAL-3895 Alphafold red/orange/yellow/green colourscheme for structures +JAL-3855 Discover and import alphafold2 models and metadata from https://alphafold.ebi.ac.uk/ +JAL-3416 FlatLAF default look and feel on Linux, OSX and everywhere else ? +JAL-2961 Jmol view not always centred on structures when multiple structures are viewed +JAL-2382 Import and display sequence-associated contact predictions in CASP-RR format +JAL-2349 Contact prediction visualisation +JAL-2348 modularise annotation renderer +JAL-1551 Standard source code formatting and editing settings -- 1.7.10.2