From a2402e4ec48d2cc1ece5980aa16069e770766551 Mon Sep 17 00:00:00 2001 From: Jim Procter Date: Mon, 24 Oct 2016 15:43:05 +0100 Subject: [PATCH] JAL-2234 reordered seqs (after sequence data was reordered) so files match the example project files --- examples/plantfdx.fa | 16 ++++++++-------- examples/uniref50.fa | 16 ++++++++-------- 2 files changed, 16 insertions(+), 16 deletions(-) diff --git a/examples/plantfdx.fa b/examples/plantfdx.fa index f314c85..80d7133 100644 --- a/examples/plantfdx.fa +++ b/examples/plantfdx.fa @@ -34,18 +34,18 @@ IETHKEEELTA- ----------------------------------------------------------ATYKVKFITPEGEQ EVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDDQIAEGFVLTCAAYPTSDVT IETHREEDMV-- ->FER1_ARATH/1-148 -----MASTALSSAIVSTSFLRRQQTPISLRSLPFANT-QSLFGLKS-STARGGRVTAMATYKVKFITPEGEQ -EVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYVLTCVAYPTSDVV -IETHKEEAIM-- ->FER_BRANA/1-96 -----------------------------------------------------------ATYKVKFITPEGEQ -EVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGFVDQSDESFLDDDQIAEGFVLTCAAYPTSDVT -IETHKEEELV-- >FER2_ARATH/1-148 ----MASTALSSAIVGTSFIRRSPAPISLRSLPSANT-QSLFGLKS-GTARGGRVTAMATYKVKFITPEGEL EVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQIGEGFVLTCAAYPTSDVT IETHKEEDIV-- +>FER_BRANA/1-96 +----------------------------------------------------------ATYKVKFITPEGEQ +EVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGFVDQSDESFLDDDQIAEGFVLTCAAYPTSDVT +IETHKEEELV-- +>FER1_ARATH/1-148 +----MASTALSSAIVSTSFLRRQQTPISLRSLPFANT-QSLFGLKS-STARGGRVTAMATYKVKFITPEGEQ +EVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYVLTCVAYPTSDVV +IETHKEEAIM-- >Q93Z60_ARATH/1-118 ----MASTALSSAIVSTSFLRRQQTPISLRSLPFANT-QSLFGLKS-STARGGRVTAMATYKVKFITPEGEQ EVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDD-------------------- diff --git a/examples/uniref50.fa b/examples/uniref50.fa index 4bdbfb4..6e6c670 100755 --- a/examples/uniref50.fa +++ b/examples/uniref50.fa @@ -34,18 +34,18 @@ TIETHKEEELTA- -----------------------------------------------------------ATYKVKFITPEGE QEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDDQIAEGFVLTCAAYPTSDV TIETHREEDMV-- ->FER1_ARATH Ferredoxin-1, chloroplast precursor -MAST----ALSSAIVSTSFLRRQQTPISLRSLPFANTQ--SLFGLKS-STARGGRVTAMATYKVKFITPEGE -QEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYVLTCVAYPTSDV -VIETHKEEAIM-- ->FER_BRANA Ferredoxin ------------------------------------------------------------ATYKVKFITPEGE -QEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGFVDQSDESFLDDDQIAEGFVLTCAAYPTSDV -TIETHKEEELV-- >FER2_ARATH Ferredoxin-2, chloroplast precursor MAST----ALSSAIVGTSFIRRSPAPISLRSLPSANTQ--SLFGLKS-GTARGGRVTAMATYKVKFITPEGE LEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQIGEGFVLTCAAYPTSDV TIETHKEEDIV-- +>FER_BRANA Ferredoxin +-----------------------------------------------------------ATYKVKFITPEGE +QEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGFVDQSDESFLDDDQIAEGFVLTCAAYPTSDV +TIETHKEEELV-- +>FER1_ARATH Ferredoxin-1, chloroplast precursor +MAST----ALSSAIVSTSFLRRQQTPISLRSLPFANTQ--SLFGLKS-STARGGRVTAMATYKVKFITPEGE +QEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYVLTCVAYPTSDV +VIETHKEEAIM-- >Q93Z60_ARATH At1g10960/T19D16_12 MAST----ALSSAIVSTSFLRRQQTPISLRSLPFANTQ--SLFGLKS-STARGGRVTAMATYKVKFITPEGE QEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDD------------------- -- 1.7.10.2