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jalview.git
2018-08-21 hansonrJAL-3026 fixes Jmol going into debug mode commit | commitdiff | tree | snapshot
2018-08-21 hansonrJAL-3026 fixes ?j2strace=xxx message, user.home, error... commit | commitdiff | tree | snapshot
2018-08-21 gmungocJAL-3032 JAL-3084 test class for JS layout bug(s) commit | commitdiff | tree | snapshot
2018-08-21 hansonrJAL-3026 JSONObject: removing annotation sensing commit | commitdiff | tree | snapshot
2018-08-21 hansonrswingjs.JSSAXParser working for Jalview commit | commitdiff | tree | snapshot
2018-08-21 hansonrJAL-3026 JmolData running; new run time and transpiler. commit | commitdiff | tree | snapshot
2018-08-21 hansonrmc_view references were MCview commit | commitdiff | tree | snapshot
2018-08-21 hansonrJAL-3026 MCview -> mc_view commit | commitdiff | tree | snapshot
2018-08-20 hansonrMerge branch 'Jalview-BH/JAL-3026' of https://source... commit | commitdiff | tree | snapshot
2018-08-20 hansonrJAL-3026 j2sClazz.js fixes commit | commitdiff | tree | snapshot
2018-08-20 gmungocJAL-3032 Feature Settings menu item always enabled... commit | commitdiff | tree | snapshot
2018-08-20 gmungocJAL-3032 variant of Sequence Details panel for JalviewJS commit | commitdiff | tree | snapshot
2018-08-20 gmungocJAL-3084 force EPS output to "Text" for JalviewJS commit | commitdiff | tree | snapshot
2018-08-20 gmungocJAL-3084 hide startup file, Chimera, HTML/SVG, Web... commit | commitdiff | tree | snapshot
2018-08-20 hansonrAdds org.json (along with "org.json.simple") for commit | commitdiff | tree | snapshot
2018-08-20 hansonrMerge branch 'Jalview-BH/JAL-3026' of https://source... commit | commitdiff | tree | snapshot
2018-08-20 hansonrfixes for anonymous classes; preliminary Jmol classes commit | commitdiff | tree | snapshot
2018-08-17 gmungocJAL-3048 remove obsolete way of handling dialogs in... commit | commitdiff | tree | snapshot
2018-08-17 gmungocJAL-3048 adapt 'input from URL' dialog for JalviewJS commit | commitdiff | tree | snapshot
2018-08-17 gmungocJAL-3038 unit test updates for JalviewJS workaround... commit | commitdiff | tree | snapshot
2018-08-16 gmungocJAL-3038 workaround to replace editable combobox with... commit | commitdiff | tree | snapshot
2018-08-16 hansonrJAL-3026 Character.toUpperCase commit | commitdiff | tree | snapshot
2018-08-16 hansonrJAL-3026 SwingJS-site.zip fix commit | commitdiff | tree | snapshot
2018-08-16 gmungocMerge branch 'bug/JAL-3082selectRegex' into Jalview... commit | commitdiff | tree | snapshot
2018-08-16 gmungocJAL-3082 one more test condition bug/JAL-3082selectRegex commit | commitdiff | tree | snapshot
2018-08-16 gmungocJAL-3082 handle regex error, exclusive threshold, unit... commit | commitdiff | tree | snapshot
2018-08-16 hansonrJava2Script 3.2.2_04 fixes Clazz._exceptionOf P$ issue commit | commitdiff | tree | snapshot
2018-08-15 gmungocJAL-3048 use JS-compatible JvOptionPane method commit | commitdiff | tree | snapshot
2018-08-15 gmungocMerge branch 'feature/JAL-3080clearTreeGroups' into... commit | commitdiff | tree | snapshot
2018-08-15 gmungocJAL-3080 remove tree partition if no groups created feature/JAL-3080clearTreeGroups commit | commitdiff | tree | snapshot
2018-08-14 gmungocJAL-3078 reset Tree font (only!) on Cancel bug/JAL-3078cancelTreeFont commit | commitdiff | tree | snapshot
2018-08-14 gmungocJAL-3032 tidy AlignmentProperties display for JalviewJS commit | commitdiff | tree | snapshot
2018-08-14 gmungocJAL-3056 no Save/Load colours xml in JalviewJS commit | commitdiff | tree | snapshot
2018-08-12 hansonrJAL-3026 refines, generalizes build-site.xml commit | commitdiff | tree | snapshot
2018-08-12 hansonrJAL-3026 refines, generalizes build-site.xml commit | commitdiff | tree | snapshot
2018-08-12 hansonrMerge branch 'Jalview-BH/JAL-3026' of https://source... commit | commitdiff | tree | snapshot
2018-08-12 hansonrJava2Script 3.2.2 upgrade commit | commitdiff | tree | snapshot
2018-08-12 gmungocJAL-3026 major update 1/2 commit | commitdiff | tree | snapshot
2018-08-10 gmungocJAL-3056 suppress Lineart option in JalviewJS commit | commitdiff | tree | snapshot
2018-07-26 gmungocJAL-3071 turn off 'mousedDragging' when stopping scrolling commit | commitdiff | tree | snapshot
2018-07-26 gmungocJAL-3071 IdPanel.ScrollThread for JalviewJS, Javadoc commit | commitdiff | tree | snapshot
2018-07-26 gmungocJAL-3071 SeqPanel scroll thread now interruptible in... commit | commitdiff | tree | snapshot
2018-07-26 gmungocMerge remote-tracking branch 'origin/bug/JAL-3072scroll... commit | commitdiff | tree | snapshot
2018-07-25 gmungocJAL-3073 select columns if dragging sideways in a graph... bug/JAL-3072scrollThread commit | commitdiff | tree | snapshot
2018-07-25 gmungocJAL-3074 don't scroll up/down on drag out of scale... commit | commitdiff | tree | snapshot
2018-07-25 gmungocJAL-3072 SeqPanel.stopScrolling on mouse up in scale... commit | commitdiff | tree | snapshot
2018-07-25 hansonrJAL-3026 Java 8 upgrade and JTabbedPane commit | commitdiff | tree | snapshot
2018-07-25 hansonrMerge branch 'Jalview-BH/JAL-3026' of https://source... commit | commitdiff | tree | snapshot
2018-07-25 hansonrmerged commit | commitdiff | tree | snapshot
2018-07-24 hansonrJAL-3032 minor SwingJS fixes for java.lang.reflect commit | commitdiff | tree | snapshot
2018-07-23 gmungocJAL-3056 suppress News menu item, remove unneeded j2sNative commit | commitdiff | tree | snapshot
2018-07-23 gmungocMerge branch 'Jalview-BH/JAL-3026' of https://source... commit | commitdiff | tree | snapshot
2018-07-23 Jim ProcterJAL-3026 JAL-3033 update classpath.js with new Jmol... commit | commitdiff | tree | snapshot
2018-07-23 gmungocJAL-3056 suppress menu options, and repoint Help, for... commit | commitdiff | tree | snapshot
2018-07-23 hansonrMerge branch 'Jalview-BH/JAL-3026' of https://source... commit | commitdiff | tree | snapshot
2018-07-23 hansonrJAL-3032 adds missing Character.valueOf(C) commit | commitdiff | tree | snapshot
2018-07-23 gmungocJAL-3048 javadoc and code tidy commit | commitdiff | tree | snapshot
2018-07-23 gmungocJAL-3048 check for headless commit | commitdiff | tree | snapshot
2018-07-23 gmungocJAL-3032 test updates to match change to implementation commit | commitdiff | tree | snapshot
2018-07-23 gmungocJAL-3049 corrected code and unit tests commit | commitdiff | tree | snapshot
2018-07-23 gmungocJAL-3048 all image export (alignment, tree, PCA, Jmol... commit | commitdiff | tree | snapshot
2018-07-23 hansonradds Boolean.prototype.objectValue() commit | commitdiff | tree | snapshot
2018-07-23 hansonrMigInfo.com layout fixe (again?) libjs rebuilt commit | commitdiff | tree | snapshot
2018-07-23 hansonradds java.util.ComparableTimSort commit | commitdiff | tree | snapshot
2018-07-23 hansonrJal-3032 adds Font.getPSName() commit | commitdiff | tree | snapshot
2018-07-22 hansonrJAL-3032 upgrade to Jmol 14.29.17; clearing of src2... commit | commitdiff | tree | snapshot
2018-07-22 hansonrallows for null Jmol viewer commit | commitdiff | tree | snapshot
2018-07-22 hansonrJAL-3032 Jmol upgrade org.jmol.java.BS -> javajs.util.BS commit | commitdiff | tree | snapshot
2018-07-22 hansonrJAL-3026 upgrades Jmol to 14.29.17 for Java. commit | commitdiff | tree | snapshot
2018-07-22 hansonrJAL-3026 Transpiler fix for GD#75 stockholm commit | commitdiff | tree | snapshot
2018-07-22 hansonrPAL-3026 missing vertical numbers for wrapped pane commit | commitdiff | tree | snapshot
2018-07-22 hansonrJAL-3026 scrollbar fix GD#, not compiling on Mac issue commit | commitdiff | tree | snapshot
2018-07-20 hansonrPAL-3026 Java 8 stream fix for commit | commitdiff | tree | snapshot
2018-07-20 hansonradds README for srcjar directory commit | commitdiff | tree | snapshot
2018-07-20 hansonradds comment commit | commitdiff | tree | snapshot
2018-07-20 hansonrJAL-3032 moving Mungo's original JalviewJS.java out... commit | commitdiff | tree | snapshot
2018-07-20 hansonrJAL-3032 adds Java 8 functionality (2/2) commit | commitdiff | tree | snapshot
2018-07-20 hansonrJAL-3032 adds Java 8 functionality (1/2) commit | commitdiff | tree | snapshot
2018-07-20 gmungocJAL-3048 test updated for AlignExportSettings changes commit | commitdiff | tree | snapshot
2018-07-20 gmungocMerge branch 'Jalview-BH/JAL-3026' of https://source... commit | commitdiff | tree | snapshot
2018-07-20 gmungocJAL-3048 JalviewJS compliant use of LineartOptions... commit | commitdiff | tree | snapshot
2018-07-20 gmungocJAL-3048 revised AlignExportSettings dialog with respon... commit | commitdiff | tree | snapshot
2018-07-19 Jim ProcterMerge branch 'develop' into Jalview-BH/JAL-3026 commit | commitdiff | tree | snapshot
2018-07-19 Jim ProcterMerge branch 'task/JAL-3047_clovercoverage' into develop commit | commitdiff | tree | snapshot
2018-07-19 Jim ProcterJAL-3047 don't set classes unconditionally (forgot... task/JAL-3047_clovercoverage commit | commitdiff | tree | snapshot
2018-07-19 gmungocJAL-3048 inlined 1-line methods, small refactor of... commit | commitdiff | tree | snapshot
2018-07-19 gmungocJAL-3048 revert saveAs action so it works in Javascript too commit | commitdiff | tree | snapshot
2018-07-18 Jim ProcterJAL-3026 updated featurecolourtooltip method signature... commit | commitdiff | tree | snapshot
2018-07-18 Jim ProcterJAL-3048 JAL-1353 bug demo update for refactored edit... commit | commitdiff | tree | snapshot
2018-07-18 Jim ProcterJAL-3048 update tests for alignment export bean refactoring commit | commitdiff | tree | snapshot
2018-07-18 Jim ProcterJAL-3048 add additional wrapper methods for JOptionPane... commit | commitdiff | tree | snapshot
2018-07-18 Jim ProcterJAL-3048 test for successful save with refactored saveA... commit | commitdiff | tree | snapshot
2018-07-18 Jim ProcterMerge branch 'develop' into Jalview-BH/JAL-3026 commit | commitdiff | tree | snapshot
2018-07-18 Jim ProcterJAL-3033 clean eclipse log before each new js-build commit | commitdiff | tree | snapshot
2018-07-18 Jim ProcterJAL-3033 clean the site directory before compilation... commit | commitdiff | tree | snapshot
2018-07-18 Jim ProcterJAL-3033 echo eclipse log to stdout for buildlog commit | commitdiff | tree | snapshot
2018-07-17 gmungocJAL-3068 LineartOptions for EPS/HTML/SVG, new preferenc... task/JAL-3068lineartDialog commit | commitdiff | tree | snapshot
2018-07-17 gmungocRevert "Revert "JAL-3032 net.sf.j2s.core_3.2.1 upgrade"" commit | commitdiff | tree | snapshot
2018-07-16 gmungocJAL-3060 tidy Cancel dialog action handler code commit | commitdiff | tree | snapshot
2018-07-16 gmungocRevert "JAL-3032 net.sf.j2s.core_3.2.1 upgrade" commit | commitdiff | tree | snapshot
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