source.jalview.org Git - jalview.git/shortlog

git://source.jalview.org / jalview.git / shortlog

2005-04-11	jprocter	added the alignment quality calculation from the old...	commit \| commitdiff \| tree \| snapshot
2005-04-11	jprocter	Conservation symbols : + = all props are conserved...	commit \| commitdiff \| tree \| snapshot
2005-04-11	jprocter	Fixed the job-failed message.	commit \| commitdiff \| tree \| snapshot
2005-04-11	jprocter	Now tries to set viewing parameters for distances and...	commit \| commitdiff \| tree \| snapshot
2005-04-08	jprocter	slight mods again.	commit \| commitdiff \| tree \| snapshot
2005-04-08	amwaterhouse	try out spinning logo	commit \| commitdiff \| tree \| snapshot
2005-04-08	amwaterhouse	return from painting if size is 0	commit \| commitdiff \| tree \| snapshot
2005-04-08	amwaterhouse	Printing wrapped alignment corrected	commit \| commitdiff \| tree \| snapshot
2005-04-08	amwaterhouse	Display of wrapped search results corrected	commit \| commitdiff \| tree \| snapshot
2005-04-08	amwaterhouse	endREs -1	commit \| commitdiff \| tree \| snapshot
2005-04-08	amwaterhouse	conservation changed to quality	commit \| commitdiff \| tree \| snapshot
2005-04-08	amwaterhouse	clear the last area in fast paint	commit \| commitdiff \| tree \| snapshot
2005-04-08	amwaterhouse	scale above, left right added	commit \| commitdiff \| tree \| snapshot
2005-04-08	amwaterhouse	bug adding null sequence to selection fixed	commit \| commitdiff \| tree \| snapshot
2005-04-08	amwaterhouse	reads fasta files from uniprot web page	commit \| commitdiff \| tree \| snapshot
2005-04-08	amwaterhouse	scale above, left rigt added	commit \| commitdiff \| tree \| snapshot
2005-04-08	jprocter	WebStartLocation form.	commit \| commitdiff \| tree \| snapshot
2005-04-08	jprocter	trival.	commit \| commitdiff \| tree \| snapshot
2005-04-08	jprocter	Fixed broken jnlp creation.	commit \| commitdiff \| tree \| snapshot
2005-04-08	jprocter	remember: do not check in quick bug fixes that you...	commit \| commitdiff \| tree \| snapshot
2005-04-08	jprocter	recent rebuild of the JPred client from WSDL2Java	commit \| commitdiff \| tree \| snapshot
2005-04-08	jprocter	Alignment quality with funky coloured histograms.	commit \| commitdiff \| tree \| snapshot
2005-04-08	jprocter	updated build strategy and checking for portability.	commit \| commitdiff \| tree \| snapshot
2005-04-07	amwaterhouse	no more group editor	commit \| commitdiff \| tree \| snapshot
2005-04-07	amwaterhouse	check annotation label widths as well as id widths	commit \| commitdiff \| tree \| snapshot
2005-04-07	amwaterhouse	calls repaint, not just refreshpanels	commit \| commitdiff \| tree \| snapshot
2005-04-07	amwaterhouse	for now, draw selection box bottom -1	commit \| commitdiff \| tree \| snapshot
2005-04-07	amwaterhouse	seals selection box if at bottom of alignment	commit \| commitdiff \| tree \| snapshot
2005-04-07	amwaterhouse	draws threshold position according to threshold, not...	commit \| commitdiff \| tree \| snapshot
2005-04-07	amwaterhouse	no longer used	commit \| commitdiff \| tree \| snapshot
2005-04-07	amwaterhouse	Remove paintFlag ref	commit \| commitdiff \| tree \| snapshot
2005-04-07	amwaterhouse	GRPAH_HEIGHT variable	commit \| commitdiff \| tree \| snapshot
2005-04-07	amwaterhouse	checkfor gap characters	commit \| commitdiff \| tree \| snapshot
2005-04-07	amwaterhouse	paintFlag removed	commit \| commitdiff \| tree \| snapshot
2005-04-07	amwaterhouse	fastPaint flag added	commit \| commitdiff \| tree \| snapshot
2005-04-07	amwaterhouse	reomve call to repaint	commit \| commitdiff \| tree \| snapshot
2005-04-07	amwaterhouse	find top and bottom of group	commit \| commitdiff \| tree \| snapshot
2005-04-07	amwaterhouse	add note about desktopManager	commit \| commitdiff \| tree \| snapshot
2005-04-07	amwaterhouse	add fastPaint boolean	commit \| commitdiff \| tree \| snapshot
2005-04-07	amwaterhouse	remove setdecorated line	commit \| commitdiff \| tree \| snapshot
2005-04-07	amwaterhouse	amino acid gifs	commit \| commitdiff \| tree \| snapshot
2005-04-06	amwaterhouse	dont draw first block if colour is null	commit \| commitdiff \| tree \| snapshot
2005-04-06	amwaterhouse	fill in the gaps	commit \| commitdiff \| tree \| snapshot
2005-04-06	amwaterhouse	setDesktopManager(new)	commit \| commitdiff \| tree \| snapshot
2005-04-06	amwaterhouse	paint is now in drawComponent	commit \| commitdiff \| tree \| snapshot
2005-04-06	amwaterhouse	showAnnotation added	commit \| commitdiff \| tree \| snapshot
2005-04-06	amwaterhouse	annoation in print version	commit \| commitdiff \| tree \| snapshot
2005-04-06	amwaterhouse	DONT SHOW ANNOTATIONS IF WRAPPED	commit \| commitdiff \| tree \| snapshot
2005-04-06	jprocter	next version of Jpred functionality using new client...	commit \| commitdiff \| tree \| snapshot
2005-04-06	jprocter	New method for helping to quickly map different aligned...	commit \| commitdiff \| tree \| snapshot
2005-04-06	jprocter	New client code for JPred service includes return of...	commit \| commitdiff \| tree \| snapshot
2005-04-06	amwaterhouse	mosueOver graph gives int, not float	commit \| commitdiff \| tree \| snapshot
2005-04-06	amwaterhouse	Fast paint method implemented	commit \| commitdiff \| tree \| snapshot
2005-04-01	amwaterhouse	Alignment Annotation added	commit \| commitdiff \| tree \| snapshot
2005-04-01	amwaterhouse	ignore jnetconf	commit \| commitdiff \| tree \| snapshot
2005-04-01	amwaterhouse	parses jpredfile into new alignment annotation	commit \| commitdiff \| tree \| snapshot
2005-04-01	amwaterhouse	update conservation and consensus	commit \| commitdiff \| tree \| snapshot
2005-04-01	amwaterhouse	anti_aliasing on	commit \| commitdiff \| tree \| snapshot
2005-04-01	amwaterhouse	Uses conservation graph	commit \| commitdiff \| tree \| snapshot
2005-04-01	amwaterhouse	testing Graphics2D	commit \| commitdiff \| tree \| snapshot
2005-04-01	amwaterhouse	setMaximizable(false)	commit \| commitdiff \| tree \| snapshot
2005-04-01	amwaterhouse	Build date determination	commit \| commitdiff \| tree \| snapshot
2005-03-31	jprocter	doh - stupid jim.	commit \| commitdiff \| tree \| snapshot
2005-03-31	jprocter	utility classes used in build.xml, and a dodgy perl...	commit \| commitdiff \| tree \| snapshot
2005-03-31	jprocter	JavaC target set to 1.4 for proper compilation of 1...	commit \| commitdiff \| tree \| snapshot
2005-03-31	jprocter	Added a flag to control if the "/<seq_start>-<seq_end...	commit \| commitdiff \| tree \| snapshot
2005-03-31	jprocter	added a an axis log4j appender property to the jalview...	commit \| commitdiff \| tree \| snapshot
2005-03-30	jprocter	new libraries for soap bits.	commit \| commitdiff \| tree \| snapshot
2005-03-30	jprocter	fixed the log4j messages.	commit \| commitdiff \| tree \| snapshot
2005-03-30	jprocter	cleaned up some comments and exception messages.	commit \| commitdiff \| tree \| snapshot
2005-03-30	jprocter	Updated version of axis to fix the j1.5 webstart problems.	commit \| commitdiff \| tree \| snapshot
2005-03-30	jprocter	Fixed a sensible default leaf distance (for files where...	commit \| commitdiff \| tree \| snapshot
2005-03-24	amwaterhouse	fix printing error	commit \| commitdiff \| tree \| snapshot
2005-03-23	amwaterhouse	new seq selection -1	commit \| commitdiff \| tree \| snapshot
2005-03-23	amwaterhouse	adjustForRemoveLeft / Right added	commit \| commitdiff \| tree \| snapshot
2005-03-23	amwaterhouse	works even if col is 1 residue	commit \| commitdiff \| tree \| snapshot
2005-03-23	amwaterhouse	reads MSF files even if PILEUP is missing	commit \| commitdiff \| tree \| snapshot
2005-03-23	amwaterhouse	drawableSequence removed	commit \| commitdiff \| tree \| snapshot
2005-03-23	amwaterhouse	no longer used	commit \| commitdiff \| tree \| snapshot
2005-03-23	amwaterhouse	secondarycolour not used	commit \| commitdiff \| tree \| snapshot
2005-03-23	amwaterhouse	add .fasta to save dialog	commit \| commitdiff \| tree \| snapshot
2005-03-23	amwaterhouse	correct wrap alignment scrollbar size	commit \| commitdiff \| tree \| snapshot
2005-03-23	amwaterhouse	resetSeqLimits altered	commit \| commitdiff \| tree \| snapshot
2005-03-23	amwaterhouse	override showSaveDialog to prompt user if file exists	commit \| commitdiff \| tree \| snapshot
2005-03-22	amwaterhouse	put bioinformatics into message	commit \| commitdiff \| tree \| snapshot
2005-03-22	amwaterhouse	drag and drop files into jalview	commit \| commitdiff \| tree \| snapshot
2005-03-22	amwaterhouse	add swing runnable to refresh panel on startup	commit \| commitdiff \| tree \| snapshot
2005-03-22	amwaterhouse	read start end if available	commit \| commitdiff \| tree \| snapshot
2005-03-21	amwaterhouse	altered layout	commit \| commitdiff \| tree \| snapshot
2005-03-21	amwaterhouse	alter vgap	commit \| commitdiff \| tree \| snapshot
2005-03-21	amwaterhouse	identifies more varied blc files	commit \| commitdiff \| tree \| snapshot
2005-03-21	amwaterhouse	blc file reader modified	commit \| commitdiff \| tree \| snapshot
2005-03-21	amwaterhouse	add setValue method	commit \| commitdiff \| tree \| snapshot
2005-03-21	amwaterhouse	fix select group bug	commit \| commitdiff \| tree \| snapshot
2005-03-21	amwaterhouse	new method for outlining groups	commit \| commitdiff \| tree \| snapshot
2005-03-21	amwaterhouse	add outline colour	commit \| commitdiff \| tree \| snapshot
2005-03-21	amwaterhouse	prevent idpanel being to narrow	commit \| commitdiff \| tree \| snapshot
2005-03-21	amwaterhouse	maintain slider values when click on a group	commit \| commitdiff \| tree \| snapshot
2005-03-21	amwaterhouse	hide idwidthadjuster if wrapped	commit \| commitdiff \| tree \| snapshot
2005-03-21	amwaterhouse	add coloursChanging boolean	commit \| commitdiff \| tree \| snapshot
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