jalview.git
2017-11-16 gmungocJAL-2835 test updated for colour by 'nested attribute'
2017-11-16 gmungocJAL-2816 tests for findFeaturesAtColumn
2017-11-15 kiramtJAL-2831 Don't show cursor if position in hidden region
2017-11-15 kiramtMerge branch 'bug/JAL-2811' into bug/JAL-2831
2017-11-15 gmungocJAL-2816 exclude filtered / thresholded out features...
2017-11-15 kiramtJAL-2811 Updated following review bug/JAL-2811
2017-11-15 kiramtJAL-2840 fix wrapped scrolling when using cursor at...
2017-11-15 kiramtJAL-2834 JAL-2836 temporarily disabled wrapped mode...
2017-11-15 gmungocJAL-2835 spike updated with latest
2017-11-15 gmungocJAL-2835 take all CSQ fields; catch invalid field match...
2017-11-15 gmungocJAL-2835 support filter/colour by nested attribute...
2017-11-15 gmungocJAL-2835 code tidy (generic type constructors)
2017-11-15 gmungocJAL-2069 dialog title now 'Variable colour'
2017-11-15 gmungocJAL- 2835 support filter on nested attribute keys
2017-11-15 gmungocJAL-2835 add filters for VCF/VEP 'fields of interest'
2017-11-15 gmungocJAL-1270 add missing "Functional" to tests
2017-11-15 kiramtJAL-2831 ported to applet
2017-11-14 kiramtJAL-2831 tidies and tests
2017-11-14 kiramtJAL-2831 tidy
2017-11-14 kiramtMerge branch 'bug/JAL-2811' into bug/JAL-2831
2017-11-14 kiramtJAL-2811 Changed to overlay on via graphics context...
2017-11-14 kiramtJAL-2811 Missed commit
2017-11-14 kiramtJAL-2811 Made it work for hidden columns/seqs too
2017-11-14 kiramtJAL-2831 Attempt at cursor fix for wrapped mode
2017-11-14 Jim ProcterJAL-2758 update uniprot retrieval test
2017-11-14 kiramtMerge branch 'bug/JAL-2811' into bug/JAL-2831
2017-11-14 kiramtJAL-2831 deal with hidden cols and seqs in new cursor...
2017-11-14 kiramtJAL-2831 Added move viewport event and set up cursor...
2017-11-14 kiramtMerge branch 'imp/JAL-2774' into bug/JAL-2831
2017-11-14 gmungocJAL-2754 corrected merge conflict
2017-11-13 Jim ProcterJAL-2758 release notes
2017-11-13 Jim ProcterJAL-2698 formatting
2017-11-13 kiramtJAL-2811 Tidy
2017-11-13 Jim ProcterMerge branch 'features/JAL-2758_shorteruniprot' into...
2017-11-13 Jim ProcterJAL-2758 remove configurable behaviour - Uniprot sequen...
2017-11-13 Jim ProcterJAL-2758 typo
2017-11-13 gmungocJAL-2738 stubs for filtering VEP and VCF fields of...
2017-11-13 kiramtJAl-2811 Working for wrapped panels too
2017-11-13 gmungocMerge branch 'develop' into features/JAL-1793VCF
2017-11-13 gmungocJAL-2662 tweak README, format code
2017-11-13 Jim ProcterJAL-2698 what's new...
2017-11-13 kiramtJAL-2811 Add layer for cursor in SeqCanvas
2017-11-13 Jim ProcterJAL-2810 release notes
2017-11-13 Jim ProcterMerge branch 'imp/JAL-2810_ftsIDtab' into develop
2017-11-13 Jim ProcterJAL-2698 stub for 2.10.3 new known issues entries
2017-11-13 Jim ProcterJAL-2702 groovy interpreter update and java 9 jnlp...
2017-11-13 Jim ProcterMerge branch 'bug/JAL-2702_groovyconsoleJava9' into...
2017-11-13 Jim ProcterJAL-2702 --illegal-access=warn for JVM launch
2017-11-13 gmungocJAL-2176 removed unused Sequence.index
2017-11-13 Jim ProcterJAL-2702 update to groovy 2.4.12
2017-11-13 Jim ProcterJAL-2810 updated help docs for auto search checkbox...
2017-11-13 kiramtJAL-2784 new checks for gg==null bug/JAL-2784
2017-11-13 Jim ProcterJAL-2810 updated screenshots in documentation
2017-11-13 Jim ProcterJAL-2810 auto search checkbox state stored as user...
2017-11-13 gmungocJAL-2679 example accession changed to CAD01290
2017-11-13 Jim ProcterJAL-2810 mainFramTabs -> tabs
2017-11-13 Jim ProcterJAL-2810 simpler tooltip (assume user will work out...
2017-11-10 Jim ProcterJAL-2828 allow CalcId to match on String equivalence... doc/JAL-2494_JAL-2828_mergefindAnnotation
2017-11-10 Jim ProcterJAL-2828 refactored duplicate code for searching lists...
2017-11-10 gmungocJAL-2829 fixes and unit tests bug/JAL-2829deleteCharsWithGaps
2017-11-10 gmungocJAL-2562 updated findPosition javadoc to match behaviour
2017-11-10 gmungocJAL-2829 unit tests for failing cases
2017-11-10 kiramtJAL-2827 related fixes for stem and non-canonical annot... bug/JAL-2827
2017-11-10 gmungocMerge branch 'develop' into features/JAL-1793VCF
2017-11-09 kiramtJAL-2827 Fix notched repaint of helix annotation when...
2017-11-08 Jim ProcterMerge branch 'bug/JAL-2742' into develop
2017-11-08 Jim ProcterRevert "JAL-2742 release notes - pending confirmation...
2017-11-08 Jim ProcterJAL-2225 release note
2017-11-08 Jim ProcterMerge branch 'bug/JAL-2225mapMultipleChains' into develop
2017-11-08 gmungocJAL-2808 i18n, widget state settings
2017-11-08 Jim ProcterMerge branch 'develop' into bug/JAL-2225mapMultipleChains
2017-11-08 gmungocJAL-2069 updated spike to latest
2017-11-08 gmungocJAL-2069 ensure threshline instantiated to avoid NPE
2017-11-08 gmungocJAL-2069 (helper method for) italic titled borders
2017-11-07 Jim ProcterJAL-2698 14 Nov 2017 release date for 2.10.3
2017-11-07 Jim ProcterJAL-2775 release notes
2017-11-07 Jim ProcterMerge branch 'imp/JAL-2775' into develop
2017-11-07 Jim ProcterJAL-2810 i18n tab label
2017-11-07 kiramtJAL-2774 Added javadoc for new event parameters imp/JAL-2774
2017-11-07 Jim ProcterJAL-2810 ‘Close’ is now ‘Cancel’ in SequenceFetcher...
2017-11-07 Jim ProcterJAL-2810 working back button shown for bulk ID retrieva...
2017-11-07 kiramtJAL-2774 Fix fastpaint of wrapped alignment
2017-11-07 kiramtJAL-2821 refactored drawPartialGroupOutline bug/JAL-2821
2017-11-07 gmungocJAL-2069 update spike to latest (no value colour options)
2017-11-07 gmungocJAL-2069 choice of no / min / max colour if 'no attribu...
2017-11-07 Jim ProcterJAL-2810 bulk fetch for PDB IDs
2017-11-07 Jim ProcterJAL-2804 clearer tooltip for autosearch checkbox
2017-11-07 gmungocJAL-2069 update spike with latest
2017-11-07 gmungocJAL-2069 corrected overloaded constructor behaviour
2017-11-07 gmungocJAL-2069 update spike branch with latest
2017-11-07 gmungocMerge branch 'develop' into features/JAL-1793VCF
2017-11-07 gmungocJAL-2069 add 'by attribute' options to graduated featur...
2017-11-07 gmungocJAL-2069 add attributeName and noValueColour to Feature...
2017-11-07 gmungocJAL-2816 tweaks to feature visibility checks
2017-11-07 gmungocJAL-2808 tweak to use Iterable for set of matchers
2017-11-07 gmungocJAL-2069 JAL-2808 utility method to build combobox...
2017-11-07 gmungocJAL-2820 limit length of residue tooltip
2017-11-06 gmungocJAL-2069 cache colours generated from labels
2017-11-06 gmungocJAL-2820 include attribute value used for feature colou...
2017-11-06 Jim ProcterJAL-2756 release notes
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