site/j2s/jalview/viewmodel/seqfeatures/FeatureRendererSettings.js

   1 Clazz.declarePackage ("jalview.viewmodel.seqfeatures");
   2 Clazz.load (null, "jalview.viewmodel.seqfeatures.FeatureRendererSettings", ["jalview.schemes.GraduatedColor", "java.util.Arrays", "java.util.concurrent.ConcurrentHashMap"], function () {
   3 c$ = Clazz.decorateAsClass (function () {
   4 this.renderOrder = null;
   5 this.featureGroups = null;
   6 this.featureColours = null;
   7 this.transparency = 0;
   8 this.featureOrder = null;
   9 Clazz.instantialize (this, arguments);
  10 }, jalview.viewmodel.seqfeatures, "FeatureRendererSettings", null, Cloneable);
  11 Clazz.makeConstructor (c$,
  12 function (renderOrder, featureGroups, featureColours, transparency, featureOrder) {
  13 this.renderOrder = java.util.Arrays.copyOf (renderOrder, renderOrder.length);
  14 this.featureGroups =  new java.util.concurrent.ConcurrentHashMap (featureGroups);
  15 this.featureColours =  new java.util.concurrent.ConcurrentHashMap (featureColours);
  16 this.transparency = transparency;
  17 this.featureOrder =  new java.util.concurrent.ConcurrentHashMap (featureOrder);
  18 }, "~A,java.util.Hashtable,java.util.Hashtable,~N,java.util.Hashtable");
  19 Clazz.makeConstructor (c$,
  20 function (fr) {
  21 this.renderOrder = null;
  22 this.featureGroups =  new java.util.concurrent.ConcurrentHashMap ();
  23 this.featureColours =  new java.util.concurrent.ConcurrentHashMap ();
  24 this.featureOrder =  new java.util.concurrent.ConcurrentHashMap ();
  25 if (fr.renderOrder != null) {
  26 this.renderOrder =  new Array (fr.renderOrder.length);
  27 System.arraycopy (fr.renderOrder, 0, this.renderOrder, 0, fr.renderOrder.length);
  28 }if (fr.featureGroups != null) {
  29 this.featureGroups =  new java.util.concurrent.ConcurrentHashMap (fr.featureGroups);
  30 }if (fr.featureColours != null) {
  31 this.featureColours =  new java.util.concurrent.ConcurrentHashMap (fr.featureColours);
  32 }var en = fr.featureColours.keySet ().iterator ();
  33 while (en.hasNext ()) {
  34 var next = en.next ();
  35 var val = this.featureColours.get (next);
  36 if (Clazz.instanceOf (val, jalview.schemes.GraduatedColor)) {
  37 this.featureColours.put (next,  new jalview.schemes.GraduatedColor (val));
  38 }}
  39 this.transparency = fr.transparency;
  40 if (fr.featureOrder != null) {
  41 this.featureOrder =  new java.util.concurrent.ConcurrentHashMap (fr.featureOrder);
  42 }}, "jalview.viewmodel.seqfeatures.FeatureRendererModel");
  43 });