JAL-1807 includes ?j2sdebug flag and DebugJS._(msg)

[jalviewjs.git] / bin / jalview / viewmodel / seqfeatures / FeaturesDisplayed.js

diff --git a/bin/jalview/viewmodel/seqfeatures/FeaturesDisplayed.js b/bin/jalview/viewmodel/seqfeatures/FeaturesDisplayed.js
index 8f0de99..32ddafc 100644 (file)
--- a/bin/jalview/viewmodel/seqfeatures/FeaturesDisplayed.js
+++ b/bin/jalview/viewmodel/seqfeatures/FeaturesDisplayed.js
@@ -1,68 +1,68 @@
-Clazz.declarePackage ("jalview.viewmodel.seqfeatures");\r
-Clazz.load (["jalview.api.FeaturesDisplayedI", "java.util.HashSet"], "jalview.viewmodel.seqfeatures.FeaturesDisplayed", null, function () {\r
-c$ = Clazz.decorateAsClass (function () {\r
-this.featuresDisplayed = null;\r
-this.featuresRegistered = null;\r
-Clazz.instantialize (this, arguments);\r
-}, jalview.viewmodel.seqfeatures, "FeaturesDisplayed", null, jalview.api.FeaturesDisplayedI);\r
-Clazz.prepareFields (c$, function () {\r
-this.featuresDisplayed =  new java.util.HashSet ();\r
-this.featuresRegistered =  new java.util.HashSet ();\r
-});\r
-Clazz.makeConstructor (c$, \r
-function (featuresDisplayed2) {\r
-var fdisp = featuresDisplayed2.getVisibleFeatures ();\r
-var ftype;\r
-while (fdisp.hasNext ()) {\r
-ftype = fdisp.next ();\r
-this.featuresDisplayed.add (ftype);\r
-this.featuresRegistered.add (ftype);\r
-}\r
-}, "jalview.api.FeaturesDisplayedI");\r
-Clazz.makeConstructor (c$, \r
-function () {\r
-});\r
-Clazz.defineMethod (c$, "getVisibleFeatures", \r
-function () {\r
-return this.featuresDisplayed.iterator ();\r
-});\r
-Clazz.overrideMethod (c$, "isVisible", \r
-function (featureType) {\r
-return this.featuresDisplayed.contains (featureType);\r
-}, "~S");\r
-Clazz.overrideMethod (c$, "areVisible", \r
-function (featureTypes) {\r
-return this.featuresDisplayed.containsAll (featureTypes);\r
-}, "java.util.Collection");\r
-Clazz.overrideMethod (c$, "clear", \r
-function () {\r
-this.featuresDisplayed.clear ();\r
-this.featuresRegistered.clear ();\r
-});\r
-Clazz.overrideMethod (c$, "setAllVisible", \r
-function (makeVisible) {\r
-this.featuresDisplayed.addAll (makeVisible);\r
-this.featuresRegistered.addAll (makeVisible);\r
-}, "java.util.Collection");\r
-Clazz.overrideMethod (c$, "setAllRegisteredVisible", \r
-function () {\r
-this.featuresDisplayed.addAll (this.featuresRegistered);\r
-});\r
-Clazz.overrideMethod (c$, "setVisible", \r
-function (featureType) {\r
-this.featuresDisplayed.add (featureType);\r
-this.featuresRegistered.add (featureType);\r
-}, "~S");\r
-Clazz.overrideMethod (c$, "isRegistered", \r
-function (type) {\r
-return this.featuresRegistered.contains (type);\r
-}, "~S");\r
-Clazz.overrideMethod (c$, "getVisibleFeatureCount", \r
-function () {\r
-return this.featuresDisplayed.size ();\r
-});\r
-Clazz.overrideMethod (c$, "getRegisterdFeaturesCount", \r
-function () {\r
-return this.featuresRegistered.size ();\r
-});\r
-});\r
+Clazz.declarePackage ("jalview.viewmodel.seqfeatures");
+Clazz.load (["jalview.api.FeaturesDisplayedI", "java.util.HashSet"], "jalview.viewmodel.seqfeatures.FeaturesDisplayed", null, function () {
+c$ = Clazz.decorateAsClass (function () {
+this.featuresDisplayed = null;
+this.featuresRegistered = null;
+Clazz.instantialize (this, arguments);
+}, jalview.viewmodel.seqfeatures, "FeaturesDisplayed", null, jalview.api.FeaturesDisplayedI);
+Clazz.prepareFields (c$, function () {
+this.featuresDisplayed =  new java.util.HashSet ();
+this.featuresRegistered =  new java.util.HashSet ();
+});
+Clazz.makeConstructor (c$, 
+function (featuresDisplayed2) {
+var fdisp = featuresDisplayed2.getVisibleFeatures ();
+var ftype;
+while (fdisp.hasNext ()) {
+ftype = fdisp.next ();
+this.featuresDisplayed.add (ftype);
+this.featuresRegistered.add (ftype);
+}
+}, "jalview.api.FeaturesDisplayedI");
+Clazz.makeConstructor (c$, 
+function () {
+});
+Clazz.defineMethod (c$, "getVisibleFeatures", 
+function () {
+return this.featuresDisplayed.iterator ();
+});
+Clazz.overrideMethod (c$, "isVisible", 
+function (featureType) {
+return this.featuresDisplayed.contains (featureType);
+}, "~S");
+Clazz.overrideMethod (c$, "areVisible", 
+function (featureTypes) {
+return this.featuresDisplayed.containsAll (featureTypes);
+}, "java.util.Collection");
+Clazz.overrideMethod (c$, "clear", 
+function () {
+this.featuresDisplayed.clear ();
+this.featuresRegistered.clear ();
+});
+Clazz.overrideMethod (c$, "setAllVisible", 
+function (makeVisible) {
+this.featuresDisplayed.addAll (makeVisible);
+this.featuresRegistered.addAll (makeVisible);
+}, "java.util.Collection");
+Clazz.overrideMethod (c$, "setAllRegisteredVisible", 
+function () {
+this.featuresDisplayed.addAll (this.featuresRegistered);
+});
+Clazz.overrideMethod (c$, "setVisible", 
+function (featureType) {
+this.featuresDisplayed.add (featureType);
+this.featuresRegistered.add (featureType);
+}, "~S");
+Clazz.overrideMethod (c$, "isRegistered", 
+function (type) {
+return this.featuresRegistered.contains (type);
+}, "~S");
+Clazz.overrideMethod (c$, "getVisibleFeatureCount", 
+function () {
+return this.featuresDisplayed.size ();
+});
+Clazz.overrideMethod (c$, "getRegisterdFeaturesCount", 
+function () {
+return this.featuresRegistered.size ();
+});
+});