Merge branch 'master' of https://source.jalview.org/git/jalviewjs.git

[jalviewjs.git] / site / j2s / jalview / schemes / RNAInteractionColourScheme.js

diff --git a/site/j2s/jalview/schemes/RNAInteractionColourScheme.js b/site/j2s/jalview/schemes/RNAInteractionColourScheme.js
index 9c2e946..6935253 100644 (file)
--- a/site/j2s/jalview/schemes/RNAInteractionColourScheme.js
+++ b/site/j2s/jalview/schemes/RNAInteractionColourScheme.js
@@ -1,27 +1,27 @@
-Clazz.declarePackage ("jalview.schemes");\r
-Clazz.load (["jalview.schemes.ResidueColourScheme"], "jalview.schemes.RNAInteractionColourScheme", ["jalview.schemes.ResidueProperties", "java.awt.Color"], function () {\r
-c$ = Clazz.declareType (jalview.schemes, "RNAInteractionColourScheme", jalview.schemes.ResidueColourScheme);\r
-Clazz.defineMethod (c$, "findColour", \r
-function (c) {\r
-return this.colors[jalview.schemes.ResidueProperties.nucleotideIndex[c.charCodeAt (0)]];\r
-}, "~S");\r
-Clazz.defineMethod (c$, "findColour", \r
-function (c, j, seq) {\r
-var currentColour;\r
-if ((this.threshold == 0) || this.aboveThreshold (c, j)) {\r
-try {\r
-currentColour = this.colors[jalview.schemes.ResidueProperties.nucleotideIndex[c.charCodeAt (0)]];\r
-} catch (ex) {\r
-if (Clazz.exceptionOf (ex, Exception)) {\r
-return java.awt.Color.white;\r
-} else {\r
-throw ex;\r
-}\r
-}\r
-} else {\r
-return java.awt.Color.white;\r
-}if (this.conservationColouring) {\r
-currentColour = this.applyConservation (currentColour, j);\r
-}return currentColour;\r
-}, "~S,~N,jalview.datamodel.SequenceI");\r
-});\r
+Clazz.declarePackage ("jalview.schemes");
+Clazz.load (["jalview.schemes.ResidueColourScheme"], "jalview.schemes.RNAInteractionColourScheme", ["jalview.schemes.ResidueProperties", "java.awt.Color"], function () {
+c$ = Clazz.declareType (jalview.schemes, "RNAInteractionColourScheme", jalview.schemes.ResidueColourScheme);
+Clazz.defineMethod (c$, "findColour", 
+function (c) {
+return this.colors[jalview.schemes.ResidueProperties.nucleotideIndex[c.charCodeAt (0)]];
+}, "~S");
+Clazz.defineMethod (c$, "findColour", 
+function (c, j, seq) {
+var currentColour;
+if ((this.threshold == 0) || this.aboveThreshold (c, j)) {
+try {
+currentColour = this.colors[jalview.schemes.ResidueProperties.nucleotideIndex[c.charCodeAt (0)]];
+} catch (ex) {
+if (Clazz.exceptionOf (ex, Exception)) {
+return java.awt.Color.white;
+} else {
+throw ex;
+}
+}
+} else {
+return java.awt.Color.white;
+}if (this.conservationColouring) {
+currentColour = this.applyConservation (currentColour, j);
+}return currentColour;
+}, "~S,~N,jalview.datamodel.SequenceI");
+});