X-Git-Url: http://source.jalview.org/gitweb/?p=jalviewjs.git;a=blobdiff_plain;f=site%2Fswingjs%2Fjs%2FSwingJS.js;fp=site%2Fswingjs%2Fjs%2FSwingJS.js;h=8bf0e05b63106502fd0bc96a740785c63fefeebb;hp=adb4fcdebffc415d0ae0c81ce336ab270c3c3ebc;hb=b9b7a352eee79b7764c3b09c9d19663075061d8c;hpb=7301a2415adab88038b291fc54caeeb3a5a47a44
diff --git a/site/swingjs/js/SwingJS.js b/site/swingjs/js/SwingJS.js
index adb4fcd..8bf0e05 100644
--- a/site/swingjs/js/SwingJS.js
+++ b/site/swingjs/js/SwingJS.js
@@ -1,415 +1,415 @@
-// SwingJS.js
-
-// BH 4/28/2015 10:15:32 PM adds getAppletHtml
-// BH 4/2/2015 5:17:44 PM adds SwingJS.getJavaResource(path)
-
-// BH 3/27/2015 6:34:49 AM just a shell
-
-if(typeof(jQuery)=="undefined") alert ("Note -- jQuery is required for SwingJS, but it's not defined.")
-
-if (typeof(SwingJS) == "undefined") {
-
- SwingJS = {};
-
-(function (SwingJS, $) {
-
- SwingJS.getApplet = function(id, Info, checkOnly) {
- return SwingJS._Applet._get(id, Info, checkOnly);
- }
-
- SwingJS.getJavaResource = function(path) {
- if (path.indexOf("http") != 0) {
- var applet = Jmol._applets[java.lang.Thread.currentThread().getName()];
- path = (applet.__Info.resourcePath || applet.__Info.j2sPath) + "/" + path
- }
- System.out.println("Swingjs.js getJavaResource " + path)
- var s = Jmol._getFileData(path);
- if (s.indexOf("[Exception") == 0)
- return null;
- if (path.lastIndexOf(".css") == path.length - 4) {
- path = path.substring(0, path.lastIndexOf("/") + 1) + "images/";
- s = s.replace(/images\//g, path)
- jQuery("head").append(jQuery(""));
- return s;
- } else if (path.lastIndexOf(".js") == path.length - 3) {
- try {
- eval(s);
- } catch (e) {
- alert("error processing " + s)
- return null;
- }
- }
- return s;
- }
-
- // optional Info here
- SwingJS.getAppletHtml = function(applet, Info) {
- if (Info) {
- var d = SwingJS._document;
- SwingJS._document = null;
- applet = SwingJS.getApplet(applet, Info);
- SwingJS._document = d;
- }
- return applet._code;
- }
-
- SwingJS._Applet = function(id, Info, checkOnly){
- window[id] = this;
- this._appletType = "SwingJS._Applet" + (Info.isSigned ? " (signed)" : "");
- this._isJava = true;
- this._availableParams = null; // all allowed
- if (checkOnly)
- return this;
- this._isSigned = Info.isSigned;
- this._readyFunction = Info.readyFunction;
- this._ready = false;
- this._isJava = true;
- this._isInfoVisible = false;
- this._applet = null;
- this._memoryLimit = Info.memoryLimit || 512;
- this._canScript = function(script) {return true;};
- this._savedOrientations = [];
- this._initialize = function(jarPath, jarFile) {
- var doReport = false;
- SwingJS._jarFile && (jarFile = SwingJS._jarFile);
- if(this._jarFile) {
- var f = this._jarFile;
- if(f.indexOf("/") >= 0) {
- alert ("This web page URL is requesting that the applet used be " + f + ". This is a possible security risk, particularly if the applet is signed, because signed applets can read and write files on your local machine or network.");
- var ok = prompt("Do you want to use applet " + f + "? ", "yes or no")
- if(ok == "yes") {
- jarPath = f.substring(0, f.lastIndexOf("/"));
- jarFile = f.substring(f.lastIndexOf("/") + 1);
- } else {
- doReport = true;
- }
- } else {
- jarFile = f;
- }
- this_isSigned = Info.isSigned = (jarFile.indexOf("Signed") >= 0);
- }
- this._jarPath = Info.jarPath = jarPath || ".";
- this._jarFile = Info.jarFile = jarFile;
- if (doReport)
- alert ("The web page URL was ignored. Continuing using " + this._jarFile + ' in directory "' + this._jarPath + '"');
- // could do something like this: Jmol.controls == undefined || Jmol.controls._onloadResetForms();
- }
- this._create(id, Info);
- return this;
- }
-
- ;(function(Applet, proto) {
-
- Applet._get = function(id, Info, checkOnly) {
-
- checkOnly || (checkOnly = false);
- Info || (Info = {});
- var DefaultInfo = {
- code: "swingjs.test.TanSugd3S",
- uncompressed: true,
- color: "#FFFFFF", // applet object background color
- width: 300,
- height: 300,
- serverURL: "http://your.server.here/jsmol.php",
- console: null, // div for where the JavaScript console will be.
- readyFunction: null,
- use: "HTML5",//other options include JAVA
- jarPath: "java",
- jarFile: "[code].jar",
- j2sPath: "j2s",
- disableJ2SLoadMonitor: false,
- disableInitialConsole: false,
- debug: false
- };
-
- // Jmol here
-
- Jmol._addDefaultInfo(Info, DefaultInfo);
- Info.jarFile && Info.code && Info.jarFile.replace(/\[code\]/,Info.code);
- Jmol._debugAlert = Info.debug;
- Info.serverURL && (Jmol._serverUrl = Info.serverURL);
-
- var javaAllowed = false;
- var applet = null;
- var List = Info.use.toUpperCase().split("#")[0].split(" ");
- for (var i = 0; i < List.length; i++) {
- switch (List[i]) {
- case "JAVA":
- javaAllowed = true;
- if (Jmol.featureDetection.supportsJava())
- applet = new Applet(id, Info, checkOnly);
- break;
- case "HTML5":
- if (Jmol.featureDetection.allowHTML5){
- applet = Applet._getCanvas(id, Info, checkOnly);
- } else {
- List.push("JAVA");
- }
- break;
- }
- if (applet != null)
- break;
- }
- if (applet == null) {
- if (checkOnly || !javaAllowed)
- applet = {_appletType : "none" };
- else if (javaAllowed)
- applet = new Applet(id, Info);
- }
-
- // keyed to both its string id and itself
- return (checkOnly ? applet : Jmol._registerApplet(id, applet));
- }
-
- Applet._getCanvas = function(id, Info, checkOnly) {
- Info._isLayered = true;
- Info._isSwing = true;
- Info._platform = "";
- Jmol._Canvas2D.prototype = Jmol._jsSetPrototype(new Applet(id, Info, true));
- return new Jmol._Canvas2D(id, Info, Info.code, checkOnly);
- };
-
- /* AngelH, mar2007:
- By (re)setting these variables in the webpage before calling Jmol.getApplet(),
- a custom message can be provided (e.g. localized for user's language) when no Java is installed.
- */
- Applet._noJavaMsg =
- "Either you do not have Java applets enabled in your web
browser or your browser is blocking this applet.
\
- Check the warning message from your browser and/or enable Java applets in
\
- your web browser preferences, or install the Java Runtime Environment from www.java.com";
-
- Applet._setCommonMethods = function(p) {
- p._showInfo = proto._showInfo;
-/// p._search = proto._search;
- p._getName = proto._getName;
- p._readyCallback = proto._readyCallback;
- }
-
- Applet._createApplet = function(applet, Info, params) {
- applet._initialize(Info.jarPath, Info.jarFile);
- var jarFile = applet._jarFile;
- var jnlp = ""
- if (Jmol._isFile) {
- // local installations need jnlp here and should reference JmolApplet(Signed).jar, not JmolApplet(Signed)0.jar
- jarFile = jarFile.replace(/0\.jar/,".jar");
- //jnlp = " jnlp_href=\"" + jarFile.replace(/\.jar/,".jnlp") + "\"";
- }
- // size is set to 100% of containers' size, but only if resizable.
- // Note that resizability in MSIE requires:
- //
- var w = (applet._containerWidth.indexOf("px") >= 0 ? applet._containerWidth : "100%");
- var h = (applet._containerHeight.indexOf("px") >= 0 ? applet._containerHeight : "100%");
- var widthAndHeight = " style=\"width:" + w + ";height:" + h + "\" ";
- var attributes = "name='" + applet._id + "_object' id='" + applet._id + "_object' " + "\n"
- + widthAndHeight + jnlp + "\n"
- params.codebase = applet._jarPath;
- params.codePath = params.codebase + "/";
- if (params.codePath.indexOf("://") < 0) {
- var base = document.location.href.split("#")[0].split("?")[0].split("/");
- base[base.length - 1] = params.codePath;
- params.codePath = base.join("/");
- }
- params.archive = jarFile;
- params.mayscript = 'true';
- params.java_arguments = "-Xmx" + Math.round(Info.memoryLimit || applet._memoryLimit) + "m";
- params.permissions = (applet._isSigned ? "all-permissions" : "sandbox");
- params.documentLocation = document.location.href;
- params.documentBase = document.location.href.split("#")[0].split("?")[0];
-
- params.jarPath = Info.jarPath;
- Jmol._syncedApplets.length && (params.synccallback = "Jmol._mySyncCallback");
- applet._startupScript && (params.script = applet._startupScript);
- var t = "\n";
- for (var i in params)
- if(params[i])
- t += " \n";
- if (Jmol.featureDetection.useIEObject || Jmol.featureDetection.useHtml4Object) {
- t = "\n";
- } else { // use applet tag
- t = "\n";
- }
- if (applet._deferApplet)
- applet._javaCode = t, t="";
- t = Jmol._getWrapper(applet, true) + t + Jmol._getWrapper(applet, false)
- + (Info.addSelectionOptions ? Jmol._getGrabberOptions(applet) : "");
- if (Jmol._debugAlert)
- alert (t);
- applet._code = Jmol._documentWrite(t);
- }
-
- proto._newApplet = function(viewerOptions) {
- this._viewerOptions = viewerOptions;
- // for now assigning this._applet here instead of in readyCallback
- this._appletPanel = new swingjs.JSAppletPanel(viewerOptions);
- this._appletPanel.start();
- }
-
- proto._addCoreFiles = function() {
- Jmol._addCoreFile("swingjs", this._j2sPath, this.__Info.preloadCore);
- if (Jmol._debugCode) {
- // no min package for that
- Jmol._addExec([this, null, "swingjs.JSAppletPanel", "load " + this.__Info.code]);
-
- }
- }
-
- proto._create = function(id, Info){
- Jmol._setObject(this, id, Info);
- var params = {
- syncId: Jmol._syncId,
- progressbar: "true",
- progresscolor: "blue",
- boxbgcolor: this._color || "black",
- boxfgcolor: "white",
- boxmessage: "Downloading Applet ...",
- //script: (this._color ? "background \"" + this._color +"\"": ""),
- code: Info.appletClass + ".class"
- };
-
- Jmol._setAppletParams(this._availableParams, params, Info);
- function sterilizeInline(model) {
- model = model.replace(/\r|\n|\r\n/g, (model.indexOf("|") >= 0 ? "\\/n" : "|")).replace(/'/g, "'");
- if(Jmol._debugAlert)
- alert ("inline model:\n" + model);
- return model;
- }
-
- params.loadInline = (Info.inlineModel ? sterilizeInline(Info.inlineModel) : "");
- params.appletReadyCallback = "Jmol._readyCallback";
- if (Jmol._syncedApplets.length)
- params.synccallback = "Jmol._mySyncCallback";
- params.java_arguments = "-Xmx" + Math.round(Info.memoryLimit || this._memoryLimit) + "m";
-
- this._initialize(Info.jarPath, Info.jarFile);
- Applet._createApplet(this, Info, params);
- }
-
-
- proto._restoreState = function(clazzName, state) {
- // applet-dependent
- }
-
- proto._readyCallback = function(id, fullid, isReady) {
- if (!isReady)
- return; // ignore -- page is closing
- Jmol._setDestroy(this);
- this._ready = true;
- var script = this._readyScript;
- if (this._defaultModel)
- Jmol._search(this, this._defaultModel, (script ? ";" + script : ""));
- else if (script)
- this._script(script);
- else if (this._src)
- this._script('load "' + this._src + '"');
- this._showInfo(true);
- this._showInfo(false);
- Jmol.Cache.setDragDrop(this);
- this._readyFunction && this._readyFunction(this);
- Jmol._setReady(this);
- var app = this._2dapplet;
- if (app && app._isEmbedded && app._ready && app.__Info.visible)
- this._show2d(true);
- }
-
- proto._showInfo = function(tf) {
- if(tf && this._2dapplet)
- this._2dapplet._show(false);
- Jmol.$html(Jmol.$(this, "infoheaderspan"), this._infoHeader);
- if (this._info)
- Jmol.$html(Jmol.$(this, "infodiv"), this._info);
- if ((!this._isInfoVisible) == (!tf))
- return;
- this._isInfoVisible = tf;
- // 1px does not work for MSIE
- if (this._isJava) {
- var x = (tf ? 2 : "100%");
- Jmol.$setSize(Jmol.$(this, "appletdiv"), x, x);
- }
- Jmol.$setVisible(Jmol.$(this, "infotablediv"), tf);
- Jmol.$setVisible(Jmol.$(this, "infoheaderdiv"), tf);
- this._show(!tf);
- }
-
- proto._show = function(tf) {
- var x = (!tf ? 2 : "100%");
- Jmol.$setSize(Jmol.$(this, "object"), x, x);
- if (!this._isJava)
- Jmol.$setVisible(Jmol.$(this, "appletdiv"), tf);
- }
-
- proto._clearConsole = function () {
- if (this._console == this._id + "_infodiv")
- this.info = "";
- if (!self.Clazz)return;
- Jmol._setConsoleDiv(this._console);
- Clazz.Console.clear();
- }
-
- proto._resizeApplet = function(size) {
- // See _jmolGetAppletSize() for the formats accepted as size [same used by jmolApplet()]
- // Special case: an empty value for width or height is accepted, meaning no change in that dimension.
-
- /*
- * private functions
- */
- function _getAppletSize(size, units) {
- /* Accepts single number, 2-value array, or object with width and height as mroperties, each one can be one of:
- percent (text string ending %), decimal 0 to 1 (percent/100), number, or text string (interpreted as nr.)
- [width, height] array of strings is returned, with units added if specified.
- Percent is relative to container div or element (which should have explicitly set size).
- */
- var width, height;
- if(( typeof size) == "object" && size != null) {
- width = size[0]||size.width;
- height = size[1]||size.height;
- } else {
- width = height = size;
- }
- return [_fixDim(width, units), _fixDim(height, units)];
- }
-
- function _fixDim(x, units) {
- var sx = "" + x;
- return (sx.length == 0 ? (units ? "" : Jmol._allowedJmolSize[2])
- : sx.indexOf("%") == sx.length - 1 ? sx
- : (x = parseFloat(x)) <= 1 && x > 0 ? x * 100 + "%"
- : (isNaN(x = Math.floor(x)) ? Jmol._allowedJmolSize[2]
- : x < Jmol._allowedJmolSize[0] ? Jmol._allowedJmolSize[0]
- : x > Jmol._allowedJmolSize[1] ? Jmol._allowedJmolSize[1]
- : x)
- + (units ? units : "")
- );
- }
-
- var sz = _getAppletSize(size, "px");
- var d = Jmol._getElement(this, "appletinfotablediv");
- d.style.width = sz[0];
- d.style.height = sz[1];
- this._containerWidth = sz[0];
- this._containerHeight = sz[1];
- if (this._is2D)
- Jmol._repaint(this, true);
- }
-
- proto._cover = function (doCover) {
- // from using getAppletHtml()
- this._newCanvas(false);
- this._showInfo(false);
- this._init();
- };
-
-
-
-})(SwingJS._Applet, SwingJS._Applet.prototype);
-
-})(SwingJS, jQuery);
-
-} // SwingJS undefined
+// SwingJS.js
+
+// BH 4/28/2015 10:15:32 PM adds getAppletHtml
+// BH 4/2/2015 5:17:44 PM adds SwingJS.getJavaResource(path)
+
+// BH 3/27/2015 6:34:49 AM just a shell
+
+if(typeof(jQuery)=="undefined") alert ("Note -- jQuery is required for SwingJS, but it's not defined.")
+
+if (typeof(SwingJS) == "undefined") {
+
+ SwingJS = {};
+
+(function (SwingJS, $) {
+
+ SwingJS.getApplet = function(id, Info, checkOnly) {
+ return SwingJS._Applet._get(id, Info, checkOnly);
+ }
+
+ SwingJS.getJavaResource = function(path) {
+ if (path.indexOf("http") != 0) {
+ var applet = Jmol._applets[java.lang.Thread.currentThread().getName()];
+ path = (applet.__Info.resourcePath || applet.__Info.j2sPath) + "/" + path
+ }
+ System.out.println("Swingjs.js getJavaResource " + path)
+ var s = Jmol._getFileData(path);
+ if (s.indexOf("[Exception") == 0)
+ return null;
+ if (path.lastIndexOf(".css") == path.length - 4) {
+ path = path.substring(0, path.lastIndexOf("/") + 1) + "images/";
+ s = s.replace(/images\//g, path)
+ jQuery("head").append(jQuery(""));
+ return s;
+ } else if (path.lastIndexOf(".js") == path.length - 3) {
+ try {
+ eval(s);
+ } catch (e) {
+ alert("error processing " + s)
+ return null;
+ }
+ }
+ return s;
+ }
+
+ // optional Info here
+ SwingJS.getAppletHtml = function(applet, Info) {
+ if (Info) {
+ var d = SwingJS._document;
+ SwingJS._document = null;
+ applet = SwingJS.getApplet(applet, Info);
+ SwingJS._document = d;
+ }
+ return applet._code;
+ }
+
+ SwingJS._Applet = function(id, Info, checkOnly){
+ window[id] = this;
+ this._appletType = "SwingJS._Applet" + (Info.isSigned ? " (signed)" : "");
+ this._isJava = true;
+ this._availableParams = null; // all allowed
+ if (checkOnly)
+ return this;
+ this._isSigned = Info.isSigned;
+ this._readyFunction = Info.readyFunction;
+ this._ready = false;
+ this._isJava = true;
+ this._isInfoVisible = false;
+ this._applet = null;
+ this._memoryLimit = Info.memoryLimit || 512;
+ this._canScript = function(script) {return true;};
+ this._savedOrientations = [];
+ this._initialize = function(jarPath, jarFile) {
+ var doReport = false;
+ SwingJS._jarFile && (jarFile = SwingJS._jarFile);
+ if(this._jarFile) {
+ var f = this._jarFile;
+ if(f.indexOf("/") >= 0) {
+ alert ("This web page URL is requesting that the applet used be " + f + ". This is a possible security risk, particularly if the applet is signed, because signed applets can read and write files on your local machine or network.");
+ var ok = prompt("Do you want to use applet " + f + "? ", "yes or no")
+ if(ok == "yes") {
+ jarPath = f.substring(0, f.lastIndexOf("/"));
+ jarFile = f.substring(f.lastIndexOf("/") + 1);
+ } else {
+ doReport = true;
+ }
+ } else {
+ jarFile = f;
+ }
+ this_isSigned = Info.isSigned = (jarFile.indexOf("Signed") >= 0);
+ }
+ this._jarPath = Info.jarPath = jarPath || ".";
+ this._jarFile = Info.jarFile = jarFile;
+ if (doReport)
+ alert ("The web page URL was ignored. Continuing using " + this._jarFile + ' in directory "' + this._jarPath + '"');
+ // could do something like this: Jmol.controls == undefined || Jmol.controls._onloadResetForms();
+ }
+ this._create(id, Info);
+ return this;
+ }
+
+ ;(function(Applet, proto) {
+
+ Applet._get = function(id, Info, checkOnly) {
+
+ checkOnly || (checkOnly = false);
+ Info || (Info = {});
+ var DefaultInfo = {
+ code: "swingjs.test.TanSugd3S",
+ uncompressed: true,
+ color: "#FFFFFF", // applet object background color
+ width: 300,
+ height: 300,
+ serverURL: "http://your.server.here/jsmol.php",
+ console: null, // div for where the JavaScript console will be.
+ readyFunction: null,
+ use: "HTML5",//other options include JAVA
+ jarPath: "java",
+ jarFile: "[code].jar",
+ j2sPath: "j2s",
+ disableJ2SLoadMonitor: false,
+ disableInitialConsole: false,
+ debug: false
+ };
+
+ // Jmol here
+
+ Jmol._addDefaultInfo(Info, DefaultInfo);
+ Info.jarFile && Info.code && Info.jarFile.replace(/\[code\]/,Info.code);
+ Jmol._debugAlert = Info.debug;
+ Info.serverURL && (Jmol._serverUrl = Info.serverURL);
+
+ var javaAllowed = false;
+ var applet = null;
+ var List = Info.use.toUpperCase().split("#")[0].split(" ");
+ for (var i = 0; i < List.length; i++) {
+ switch (List[i]) {
+ case "JAVA":
+ javaAllowed = true;
+ if (Jmol.featureDetection.supportsJava())
+ applet = new Applet(id, Info, checkOnly);
+ break;
+ case "HTML5":
+ if (Jmol.featureDetection.allowHTML5){
+ applet = Applet._getCanvas(id, Info, checkOnly);
+ } else {
+ List.push("JAVA");
+ }
+ break;
+ }
+ if (applet != null)
+ break;
+ }
+ if (applet == null) {
+ if (checkOnly || !javaAllowed)
+ applet = {_appletType : "none" };
+ else if (javaAllowed)
+ applet = new Applet(id, Info);
+ }
+
+ // keyed to both its string id and itself
+ return (checkOnly ? applet : Jmol._registerApplet(id, applet));
+ }
+
+ Applet._getCanvas = function(id, Info, checkOnly) {
+ Info._isLayered = true;
+ Info._isSwing = true;
+ Info._platform = "";
+ Jmol._Canvas2D.prototype = Jmol._jsSetPrototype(new Applet(id, Info, true));
+ return new Jmol._Canvas2D(id, Info, Info.code, checkOnly);
+ };
+
+ /* AngelH, mar2007:
+ By (re)setting these variables in the webpage before calling Jmol.getApplet(),
+ a custom message can be provided (e.g. localized for user's language) when no Java is installed.
+ */
+ Applet._noJavaMsg =
+ "Either you do not have Java applets enabled in your web
browser or your browser is blocking this applet.
\
+ Check the warning message from your browser and/or enable Java applets in
\
+ your web browser preferences, or install the Java Runtime Environment from www.java.com";
+
+ Applet._setCommonMethods = function(p) {
+ p._showInfo = proto._showInfo;
+/// p._search = proto._search;
+ p._getName = proto._getName;
+ p._readyCallback = proto._readyCallback;
+ }
+
+ Applet._createApplet = function(applet, Info, params) {
+ applet._initialize(Info.jarPath, Info.jarFile);
+ var jarFile = applet._jarFile;
+ var jnlp = ""
+ if (Jmol._isFile) {
+ // local installations need jnlp here and should reference JmolApplet(Signed).jar, not JmolApplet(Signed)0.jar
+ jarFile = jarFile.replace(/0\.jar/,".jar");
+ //jnlp = " jnlp_href=\"" + jarFile.replace(/\.jar/,".jnlp") + "\"";
+ }
+ // size is set to 100% of containers' size, but only if resizable.
+ // Note that resizability in MSIE requires:
+ //
+ var w = (applet._containerWidth.indexOf("px") >= 0 ? applet._containerWidth : "100%");
+ var h = (applet._containerHeight.indexOf("px") >= 0 ? applet._containerHeight : "100%");
+ var widthAndHeight = " style=\"width:" + w + ";height:" + h + "\" ";
+ var attributes = "name='" + applet._id + "_object' id='" + applet._id + "_object' " + "\n"
+ + widthAndHeight + jnlp + "\n"
+ params.codebase = applet._jarPath;
+ params.codePath = params.codebase + "/";
+ if (params.codePath.indexOf("://") < 0) {
+ var base = document.location.href.split("#")[0].split("?")[0].split("/");
+ base[base.length - 1] = params.codePath;
+ params.codePath = base.join("/");
+ }
+ params.archive = jarFile;
+ params.mayscript = 'true';
+ params.java_arguments = "-Xmx" + Math.round(Info.memoryLimit || applet._memoryLimit) + "m";
+ params.permissions = (applet._isSigned ? "all-permissions" : "sandbox");
+ params.documentLocation = document.location.href;
+ params.documentBase = document.location.href.split("#")[0].split("?")[0];
+
+ params.jarPath = Info.jarPath;
+ Jmol._syncedApplets.length && (params.synccallback = "Jmol._mySyncCallback");
+ applet._startupScript && (params.script = applet._startupScript);
+ var t = "\n";
+ for (var i in params)
+ if(params[i])
+ t += " \n";
+ if (Jmol.featureDetection.useIEObject || Jmol.featureDetection.useHtml4Object) {
+ t = "\n";
+ } else { // use applet tag
+ t = "\n";
+ }
+ if (applet._deferApplet)
+ applet._javaCode = t, t="";
+ t = Jmol._getWrapper(applet, true) + t + Jmol._getWrapper(applet, false)
+ + (Info.addSelectionOptions ? Jmol._getGrabberOptions(applet) : "");
+ if (Jmol._debugAlert)
+ alert (t);
+ applet._code = Jmol._documentWrite(t);
+ }
+
+ proto._newApplet = function(viewerOptions) {
+ this._viewerOptions = viewerOptions;
+ // for now assigning this._applet here instead of in readyCallback
+ this._appletPanel = new swingjs.JSAppletPanel(viewerOptions);
+ this._appletPanel.start();
+ }
+
+ proto._addCoreFiles = function() {
+ Jmol._addCoreFile("swingjs", this._j2sPath, this.__Info.preloadCore);
+ if (Jmol._debugCode) {
+ // no min package for that
+ Jmol._addExec([this, null, "swingjs.JSAppletPanel", "load " + this.__Info.code]);
+
+ }
+ }
+
+ proto._create = function(id, Info){
+ Jmol._setObject(this, id, Info);
+ var params = {
+ syncId: Jmol._syncId,
+ progressbar: "true",
+ progresscolor: "blue",
+ boxbgcolor: this._color || "black",
+ boxfgcolor: "white",
+ boxmessage: "Downloading Applet ...",
+ //script: (this._color ? "background \"" + this._color +"\"": ""),
+ code: Info.appletClass + ".class"
+ };
+
+ Jmol._setAppletParams(this._availableParams, params, Info);
+ function sterilizeInline(model) {
+ model = model.replace(/\r|\n|\r\n/g, (model.indexOf("|") >= 0 ? "\\/n" : "|")).replace(/'/g, "'");
+ if(Jmol._debugAlert)
+ alert ("inline model:\n" + model);
+ return model;
+ }
+
+ params.loadInline = (Info.inlineModel ? sterilizeInline(Info.inlineModel) : "");
+ params.appletReadyCallback = "Jmol._readyCallback";
+ if (Jmol._syncedApplets.length)
+ params.synccallback = "Jmol._mySyncCallback";
+ params.java_arguments = "-Xmx" + Math.round(Info.memoryLimit || this._memoryLimit) + "m";
+
+ this._initialize(Info.jarPath, Info.jarFile);
+ Applet._createApplet(this, Info, params);
+ }
+
+
+ proto._restoreState = function(clazzName, state) {
+ // applet-dependent
+ }
+
+ proto._readyCallback = function(id, fullid, isReady) {
+ if (!isReady)
+ return; // ignore -- page is closing
+ Jmol._setDestroy(this);
+ this._ready = true;
+ var script = this._readyScript;
+ if (this._defaultModel)
+ Jmol._search(this, this._defaultModel, (script ? ";" + script : ""));
+ else if (script)
+ this._script(script);
+ else if (this._src)
+ this._script('load "' + this._src + '"');
+ this._showInfo(true);
+ this._showInfo(false);
+ Jmol.Cache.setDragDrop(this);
+ this._readyFunction && this._readyFunction(this);
+ Jmol._setReady(this);
+ var app = this._2dapplet;
+ if (app && app._isEmbedded && app._ready && app.__Info.visible)
+ this._show2d(true);
+ }
+
+ proto._showInfo = function(tf) {
+ if(tf && this._2dapplet)
+ this._2dapplet._show(false);
+ Jmol.$html(Jmol.$(this, "infoheaderspan"), this._infoHeader);
+ if (this._info)
+ Jmol.$html(Jmol.$(this, "infodiv"), this._info);
+ if ((!this._isInfoVisible) == (!tf))
+ return;
+ this._isInfoVisible = tf;
+ // 1px does not work for MSIE
+ if (this._isJava) {
+ var x = (tf ? 2 : "100%");
+ Jmol.$setSize(Jmol.$(this, "appletdiv"), x, x);
+ }
+ Jmol.$setVisible(Jmol.$(this, "infotablediv"), tf);
+ Jmol.$setVisible(Jmol.$(this, "infoheaderdiv"), tf);
+ this._show(!tf);
+ }
+
+ proto._show = function(tf) {
+ var x = (!tf ? 2 : "100%");
+ Jmol.$setSize(Jmol.$(this, "object"), x, x);
+ if (!this._isJava)
+ Jmol.$setVisible(Jmol.$(this, "appletdiv"), tf);
+ }
+
+ proto._clearConsole = function () {
+ if (this._console == this._id + "_infodiv")
+ this.info = "";
+ if (!self.Clazz)return;
+ Jmol._setConsoleDiv(this._console);
+ Clazz.Console.clear();
+ }
+
+ proto._resizeApplet = function(size) {
+ // See _jmolGetAppletSize() for the formats accepted as size [same used by jmolApplet()]
+ // Special case: an empty value for width or height is accepted, meaning no change in that dimension.
+
+ /*
+ * private functions
+ */
+ function _getAppletSize(size, units) {
+ /* Accepts single number, 2-value array, or object with width and height as mroperties, each one can be one of:
+ percent (text string ending %), decimal 0 to 1 (percent/100), number, or text string (interpreted as nr.)
+ [width, height] array of strings is returned, with units added if specified.
+ Percent is relative to container div or element (which should have explicitly set size).
+ */
+ var width, height;
+ if(( typeof size) == "object" && size != null) {
+ width = size[0]||size.width;
+ height = size[1]||size.height;
+ } else {
+ width = height = size;
+ }
+ return [_fixDim(width, units), _fixDim(height, units)];
+ }
+
+ function _fixDim(x, units) {
+ var sx = "" + x;
+ return (sx.length == 0 ? (units ? "" : Jmol._allowedJmolSize[2])
+ : sx.indexOf("%") == sx.length - 1 ? sx
+ : (x = parseFloat(x)) <= 1 && x > 0 ? x * 100 + "%"
+ : (isNaN(x = Math.floor(x)) ? Jmol._allowedJmolSize[2]
+ : x < Jmol._allowedJmolSize[0] ? Jmol._allowedJmolSize[0]
+ : x > Jmol._allowedJmolSize[1] ? Jmol._allowedJmolSize[1]
+ : x)
+ + (units ? units : "")
+ );
+ }
+
+ var sz = _getAppletSize(size, "px");
+ var d = Jmol._getElement(this, "appletinfotablediv");
+ d.style.width = sz[0];
+ d.style.height = sz[1];
+ this._containerWidth = sz[0];
+ this._containerHeight = sz[1];
+ if (this._is2D)
+ Jmol._repaint(this, true);
+ }
+
+ proto._cover = function (doCover) {
+ // from using getAppletHtml()
+ this._newCanvas(false);
+ this._showInfo(false);
+ this._init();
+ };
+
+
+
+})(SwingJS._Applet, SwingJS._Applet.prototype);
+
+})(SwingJS, jQuery);
+
+} // SwingJS undefined