JPRED-2 Initial commit of software for the Jpred website (some files excluded due...

[jpred.git] / websoft / data / blast / BLOSUM80

diff --git a/websoft/data/blast/BLOSUM80 b/websoft/data/blast/BLOSUM80
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+#  Matrix made by matblas from blosum80.iij
+#  * column uses minimum score
+#  BLOSUM Clustered Scoring Matrix in 1/2 Bit Units
+#  Blocks Database = /data/blocks_5.0/blocks.dat
+#  Cluster Percentage: >= 80
+#  Entropy =   0.9868, Expected =  -0.7442
+   A  R  N  D  C  Q  E  G  H  I  L  K  M  F  P  S  T  W  Y  V  B  Z  X  *  
+A  5 -2 -2 -2 -1 -1 -1  0 -2 -2 -2 -1 -1 -3 -1  1  0 -3 -2  0 -2 -1 -1 -6 
+R -2  6 -1 -2 -4  1 -1 -3  0 -3 -3  2 -2 -4 -2 -1 -1 -4 -3 -3 -2  0 -1 -6 
+N -2 -1  6  1 -3  0 -1 -1  0 -4 -4  0 -3 -4 -3  0  0 -4 -3 -4  4  0 -1 -6 
+D -2 -2  1  6 -4 -1  1 -2 -2 -4 -5 -1 -4 -4 -2 -1 -1 -6 -4 -4  4  1 -1 -6 
+C -1 -4 -3 -4  9 -4 -5 -4 -4 -2 -2 -4 -2 -3 -4 -2 -1 -3 -3 -1 -4 -4 -1 -6 
+Q -1  1  0 -1 -4  6  2 -2  1 -3 -3  1  0 -4 -2  0 -1 -3 -2 -3  0  3 -1 -6 
+E -1 -1 -1  1 -5  2  6 -3  0 -4 -4  1 -2 -4 -2  0 -1 -4 -3 -3  1  4 -1 -6 
+G  0 -3 -1 -2 -4 -2 -3  6 -3 -5 -4 -2 -4 -4 -3 -1 -2 -4 -4 -4 -1 -3 -1 -6 
+H -2  0  0 -2 -4  1  0 -3  8 -4 -3 -1 -2 -2 -3 -1 -2 -3  2 -4 -1  0 -1 -6 
+I -2 -3 -4 -4 -2 -3 -4 -5 -4  5  1 -3  1 -1 -4 -3 -1 -3 -2  3 -4 -4 -1 -6 
+L -2 -3 -4 -5 -2 -3 -4 -4 -3  1  4 -3  2  0 -3 -3 -2 -2 -2  1 -4 -3 -1 -6 
+K -1  2  0 -1 -4  1  1 -2 -1 -3 -3  5 -2 -4 -1 -1 -1 -4 -3 -3 -1  1 -1 -6 
+M -1 -2 -3 -4 -2  0 -2 -4 -2  1  2 -2  6  0 -3 -2 -1 -2 -2  1 -3 -2 -1 -6 
+F -3 -4 -4 -4 -3 -4 -4 -4 -2 -1  0 -4  0  6 -4 -3 -2  0  3 -1 -4 -4 -1 -6 
+P -1 -2 -3 -2 -4 -2 -2 -3 -3 -4 -3 -1 -3 -4  8 -1 -2 -5 -4 -3 -2 -2 -1 -6 
+S  1 -1  0 -1 -2  0  0 -1 -1 -3 -3 -1 -2 -3 -1  5  1 -4 -2 -2  0  0 -1 -6 
+T  0 -1  0 -1 -1 -1 -1 -2 -2 -1 -2 -1 -1 -2 -2  1  5 -4 -2  0 -1 -1 -1 -6 
+W -3 -4 -4 -6 -3 -3 -4 -4 -3 -3 -2 -4 -2  0 -5 -4 -4 11  2 -3 -5 -4 -1 -6 
+Y -2 -3 -3 -4 -3 -2 -3 -4  2 -2 -2 -3 -2  3 -4 -2 -2  2  7 -2 -3 -3 -1 -6 
+V  0 -3 -4 -4 -1 -3 -3 -4 -4  3  1 -3  1 -1 -3 -2  0 -3 -2  4 -4 -3 -1 -6 
+B -2 -2  4  4 -4  0  1 -1 -1 -4 -4 -1 -3 -4 -2  0 -1 -5 -3 -4  4  0 -1 -6 
+Z -1  0  0  1 -4  3  4 -3  0 -4 -3  1 -2 -4 -2  0 -1 -4 -3 -3  0  4 -1 -6 
+X -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -6 
+* -6 -6 -6 -6 -6 -6 -6 -6 -6 -6 -6 -6 -6 -6 -6 -6 -6 -6 -6 -6 -6 -6 -6  1