JPRED-2 Initial commit of software for the Jpred website (some files excluded due...

[jpred.git] / websoft / data / blast / KShopp.flt

diff --git a/websoft/data/blast/KShopp.flt b/websoft/data/blast/KShopp.flt
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+;Antigenicity    ; 16 character descriptor
+;2               ; 1=Nucleic  2=Protein
+1                ; 1=Filter   2-64=No. Pos. in Matrix
+6                ; 3-256=Filter Window  0-100=Percent Cutoff Matrix Output
+  -0.500   A  Ala
+   1.600   BB Asx
+  -1.000   C  Cys   Note: Columns 1-8 must contain 1 numeric value only
+   3.000   D  Asp
+   3.000   E  Glu
+  -2.500   F  Phe
+   0.000   G  Gly
+  -0.500   H  His
+  -1.800   I  Ile
+   3.000   K  Lys
+  -1.800   L  Leu
+  -1.300   M  Met
+   0.200   N  Asn
+   0.000   P  Pro
+   0.200   Q  Gln
+   3.000   R  Arg
+   0.300   S  Ser
+  -0.400   T  Thr
+  -1.500   V  Val
+  -3.400   W  Trp
+  -0.200   X- Unk
+  -2.300   Y  Tyr
+   1.600   ZZ Glx
+  -0.200   ** ***
+;Antigenicity - Hopp and Woods (Hydrophilicity Index)
+;A window of 6 residues is the published (and recomended)
+;value for calculating the moving average