From 47dd2d7ec5618d9dc2afda026c5c94676f18a979 Mon Sep 17 00:00:00 2001 From: Sasha Sherstnev Date: Wed, 29 Jan 2014 14:24:15 +0000 Subject: [PATCH] Clean up the code --- server/compbio/ws/jpred/Jpred.java | 6 ++-- server/compbio/ws/jpred/JpredClient.java | 9 +---- server/compbio/ws/jpred/WSPublisher.java | 10 +++--- server/compbio/ws/jpred/proteocache-WS/Jpred.java | 13 ------- .../ws/jpred/proteocache-WS/JpredClient.java | 37 -------------------- .../compbio/ws/jpred/proteocache-WS/JpredWS.java | 22 ------------ 6 files changed, 8 insertions(+), 89 deletions(-) delete mode 100644 server/compbio/ws/jpred/proteocache-WS/Jpred.java delete mode 100644 server/compbio/ws/jpred/proteocache-WS/JpredClient.java delete mode 100644 server/compbio/ws/jpred/proteocache-WS/JpredWS.java diff --git a/server/compbio/ws/jpred/Jpred.java b/server/compbio/ws/jpred/Jpred.java index 7d5f586..7d72d64 100644 --- a/server/compbio/ws/jpred/Jpred.java +++ b/server/compbio/ws/jpred/Jpred.java @@ -1,13 +1,11 @@ package compbio.ws.jpred; - import javax.jws.WebParam; import javax.jws.WebService; @WebService(targetNamespace = "http://server.ws.compbio") public interface Jpred { - - public String findSequence( - @WebParam(name = "sequence") String sequence); + + public String findSequence(@WebParam(name = "sequence") String sequence); } diff --git a/server/compbio/ws/jpred/JpredClient.java b/server/compbio/ws/jpred/JpredClient.java index ae89eec..40cbdd6 100644 --- a/server/compbio/ws/jpred/JpredClient.java +++ b/server/compbio/ws/jpred/JpredClient.java @@ -1,9 +1,3 @@ - -/** - * Please modify this class to meet your needs - * This class is not complete - */ - package compbio.ws.jpred; import java.util.Properties; @@ -14,8 +8,7 @@ import javax.xml.namespace.QName; import java.net.URL; /** - * This class was generated by Apache CXF 2.7.8 - * 2013-12-09T11:22:58.858Z + * This class was generated by Apache CXF 2.7.8 2013-12-09T11:22:58.858Z * Generated source version: 2.7.8 * */ diff --git a/server/compbio/ws/jpred/WSPublisher.java b/server/compbio/ws/jpred/WSPublisher.java index f3045cd..01747e0 100644 --- a/server/compbio/ws/jpred/WSPublisher.java +++ b/server/compbio/ws/jpred/WSPublisher.java @@ -3,10 +3,10 @@ package compbio.ws.jpred; import javax.xml.ws.Endpoint; public class WSPublisher { - + public static void main(String[] args) { - Endpoint.publish("http://localhost:1236/proteocache/services", new JpredWS()); - - System.out.println("Service is published!"); - } + Endpoint.publish("http://localhost:1236/proteocache/services", new JpredWS()); + + System.out.println("Service is published!"); + } } diff --git a/server/compbio/ws/jpred/proteocache-WS/Jpred.java b/server/compbio/ws/jpred/proteocache-WS/Jpred.java deleted file mode 100644 index 7d5f586..0000000 --- a/server/compbio/ws/jpred/proteocache-WS/Jpred.java +++ /dev/null @@ -1,13 +0,0 @@ -package compbio.ws.jpred; - - -import javax.jws.WebParam; -import javax.jws.WebService; - -@WebService(targetNamespace = "http://server.ws.compbio") -public interface Jpred { - - public String findSequence( - @WebParam(name = "sequence") String sequence); - -} diff --git a/server/compbio/ws/jpred/proteocache-WS/JpredClient.java b/server/compbio/ws/jpred/proteocache-WS/JpredClient.java deleted file mode 100644 index 78d7d95..0000000 --- a/server/compbio/ws/jpred/proteocache-WS/JpredClient.java +++ /dev/null @@ -1,37 +0,0 @@ - -/** - * Please modify this class to meet your needs - * This class is not complete - */ - -package compbio.ws.server; - -import java.util.Properties; - -import javax.xml.ws.Service; -import javax.xml.namespace.QName; - -import java.net.URL; - -/** - * This class was generated by Apache CXF 2.7.8 - * 2013-12-09T11:22:58.858Z - * Generated source version: 2.7.8 - * - */ -public class JpredClient { - - public static void main(String[] args) throws Exception { - Properties properties = new Properties(); - properties.setProperty("openejb.embedded.remotable", "true"); - QName qname = new QName("http://server.ws.compbio", "JpredWSService"); - Service service = Service.create(new URL("http://localhost:8080/proteocache/services/JpredWS?wsdl"), - qname); - - // QName qq = service.getServiceName(); - // - Jpred sequense = service.getPort(service.getPorts().next(), Jpred.class); - System.out.println(" : " + sequense.findSequence("erwerw")); - } - -} diff --git a/server/compbio/ws/jpred/proteocache-WS/JpredWS.java b/server/compbio/ws/jpred/proteocache-WS/JpredWS.java deleted file mode 100644 index 15977aa..0000000 --- a/server/compbio/ws/jpred/proteocache-WS/JpredWS.java +++ /dev/null @@ -1,22 +0,0 @@ -package compbio.ws.server; - -import javax.jws.WebService; - -import compbio.statistic.CassandraRequester; - - -@WebService(endpointInterface = "compbio.ws.server.Jpred", -targetNamespace = "http://server.ws.compbio", serviceName = "JpredWS") -public class JpredWS implements Jpred { - - @Override - public String findSequence(String sequence) { - CassandraRequester cr = new CassandraRequester(); - System.out.println("YES"); - if (cr.readProteins(sequence, "whole") != null) - return "The sequence is " + sequence; - else - return "No sequence " + sequence; - } - -} -- 1.7.10.2