/*\r
- * This class was automatically generated with \r
- * <a href="http://www.castor.org">Castor 1.1</a>, using an XML\r
- * Schema.\r
- * $Id$\r
+ * This file is part of the Vamsas Client version 0.1. \r
+ * Copyright 2009 by Jim Procter, Iain Milne, Pierre Marguerite, \r
+ * Andrew Waterhouse and Dominik Lindner.\r
+ * \r
+ * Earlier versions have also been incorporated into Jalview version 2.4 \r
+ * since 2008, and TOPALi version 2 since 2007.\r
+ * \r
+ * The Vamsas Client is free software: you can redistribute it and/or modify\r
+ * it under the terms of the GNU Lesser General Public License as published by\r
+ * the Free Software Foundation, either version 3 of the License, or\r
+ * (at your option) any later version.\r
+ * \r
+ * The Vamsas Client is distributed in the hope that it will be useful,\r
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of\r
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the\r
+ * GNU Lesser General Public License for more details.\r
+ * \r
+ * You should have received a copy of the GNU Lesser General Public License\r
+ * along with the Vamsas Client. If not, see <http://www.gnu.org/licenses/>.\r
*/\r
-\r
package uk.ac.vamsas.objects.core;\r
\r
- //---------------------------------/\r
- //- Imported classes and packages -/\r
+//---------------------------------/\r
+//- Imported classes and packages -/\r
//---------------------------------/\r
\r
import org.exolab.castor.xml.Marshaller;\r
* \r
* @version $Revision$ $Date$\r
*/\r
-public class Attachment extends uk.ac.vamsas.objects.core.AppData \r
-implements java.io.Serializable\r
-{\r
-\r
-\r
- //--------------------------/\r
- //- Class/Member Variables -/\r
- //--------------------------/\r
-\r
- /**\r
- * true implies data will be decompresses with Zip\r
- * before presenting to application \r
- */\r
- private boolean _compressed = false;\r
-\r
- /**\r
- * keeps track of state for field: _compressed\r
+public class Attachment extends uk.ac.vamsas.objects.core.AppData implements\r
+ java.io.Serializable {\r
+\r
+ // --------------------------/\r
+ // - Class/Member Variables -/\r
+ // --------------------------/\r
+\r
+ /**\r
+ * true implies data will be decompresses with Zip before presenting to\r
+ * application\r
+ */\r
+ private boolean _compressed = false;\r
+\r
+ /**\r
+ * keeps track of state for field: _compressed\r
+ */\r
+ private boolean _has_compressed;\r
+\r
+ /**\r
+ * Type of arbitrary data - TODO: decide format - use (extended) MIME types ?\r
+ */\r
+ private java.lang.String _type;\r
+\r
+ /**\r
+ * Object the arbitrary data is associated with\r
+ * \r
+ */\r
+ private java.lang.Object _objectref;\r
+\r
+ /**\r
+ * Primary Key for vamsas object referencing\r
+ * \r
+ */\r
+ private java.lang.String _id;\r
+\r
+ // ----------------/\r
+ // - Constructors -/\r
+ // ----------------/\r
+\r
+ public Attachment() {\r
+ super();\r
+ }\r
+\r
+ // -----------/\r
+ // - Methods -/\r
+ // -----------/\r
+\r
+ /**\r
*/\r
- private boolean _has_compressed;\r
-\r
- /**\r
- * Type of arbitrary data - TODO: decide format - use\r
- * (extended) MIME types ? \r
- */\r
- private java.lang.String _type;\r
-\r
- /**\r
- * Object the arbitrary data is associated with\r
- * \r
- */\r
- private java.lang.Object _objectref;\r
-\r
- /**\r
- * Primary Key for vamsas object referencing\r
- * \r
- */\r
- private java.lang.String _id;\r
-\r
-\r
- //----------------/\r
- //- Constructors -/\r
- //----------------/\r
-\r
- public Attachment() {\r
- super();\r
- }\r
-\r
-\r
- //-----------/\r
- //- Methods -/\r
- //-----------/\r
-\r
- /**\r
- */\r
- public void deleteCompressed(\r
- ) {\r
- this._has_compressed= false;\r
- }\r
-\r
- /**\r
- * Overrides the java.lang.Object.equals method.\r
- * \r
- * @param obj\r
- * @return true if the objects are equal.\r
- */\r
- public boolean equals(\r
- final java.lang.Object obj) {\r
- if ( this == obj )\r
- return true;\r
- \r
- if (super.equals(obj)==false)\r
+ public void deleteCompressed() {\r
+ this._has_compressed = false;\r
+ }\r
+\r
+ /**\r
+ * Overrides the java.lang.Object.equals method.\r
+ * \r
+ * @param obj\r
+ * @return true if the objects are equal.\r
+ */\r
+ public boolean equals(final java.lang.Object obj) {\r
+ if (this == obj)\r
+ return true;\r
+\r
+ if (super.equals(obj) == false)\r
+ return false;\r
+\r
+ if (obj instanceof Attachment) {\r
+\r
+ Attachment temp = (Attachment) obj;\r
+ boolean thcycle;\r
+ boolean tmcycle;\r
+ if (this._compressed != temp._compressed)\r
+ return false;\r
+ if (this._has_compressed != temp._has_compressed)\r
+ return false;\r
+ if (this._type != null) {\r
+ if (temp._type == null)\r
+ return false;\r
+ if (this._type != temp._type) {\r
+ thcycle = org.castor.util.CycleBreaker.startingToCycle(this._type);\r
+ tmcycle = org.castor.util.CycleBreaker.startingToCycle(temp._type);\r
+ if (thcycle != tmcycle) {\r
+ if (!thcycle) {\r
+ org.castor.util.CycleBreaker.releaseCycleHandle(this._type);\r
+ }\r
+ ;\r
+ if (!tmcycle) {\r
+ org.castor.util.CycleBreaker.releaseCycleHandle(temp._type);\r
+ }\r
+ ;\r
return false;\r
- \r
- if (obj instanceof Attachment) {\r
- \r
- Attachment temp = (Attachment)obj;\r
- boolean thcycle;\r
- boolean tmcycle;\r
- if (this._compressed != temp._compressed)\r
- return false;\r
- if (this._has_compressed != temp._has_compressed)\r
- return false;\r
- if (this._type != null) {\r
- if (temp._type == null) return false;\r
- if (this._type != temp._type) {\r
- thcycle=org.castor.util.CycleBreaker.startingToCycle(this._type);\r
- tmcycle=org.castor.util.CycleBreaker.startingToCycle(temp._type);\r
- if (thcycle!=tmcycle) {\r
- if (!thcycle) { org.castor.util.CycleBreaker.releaseCycleHandle(this._type); };\r
- if (!tmcycle) { org.castor.util.CycleBreaker.releaseCycleHandle(temp._type); };\r
- return false;\r
- }\r
- if (!thcycle) {\r
- if (!this._type.equals(temp._type)) {\r
- org.castor.util.CycleBreaker.releaseCycleHandle(this._type);\r
- org.castor.util.CycleBreaker.releaseCycleHandle(temp._type);\r
- return false;\r
- }\r
- org.castor.util.CycleBreaker.releaseCycleHandle(this._type);\r
- org.castor.util.CycleBreaker.releaseCycleHandle(temp._type);\r
- }\r
- }\r
- } else if (temp._type != null)\r
- return false;\r
- if (this._objectref != null) {\r
- if (temp._objectref == null) return false;\r
- if (this._objectref != temp._objectref) {\r
- thcycle=org.castor.util.CycleBreaker.startingToCycle(this._objectref);\r
- tmcycle=org.castor.util.CycleBreaker.startingToCycle(temp._objectref);\r
- if (thcycle!=tmcycle) {\r
- if (!thcycle) { org.castor.util.CycleBreaker.releaseCycleHandle(this._objectref); };\r
- if (!tmcycle) { org.castor.util.CycleBreaker.releaseCycleHandle(temp._objectref); };\r
- return false;\r
- }\r
- if (!thcycle) {\r
- if (!this._objectref.equals(temp._objectref)) {\r
- org.castor.util.CycleBreaker.releaseCycleHandle(this._objectref);\r
- org.castor.util.CycleBreaker.releaseCycleHandle(temp._objectref);\r
- return false;\r
- }\r
- org.castor.util.CycleBreaker.releaseCycleHandle(this._objectref);\r
- org.castor.util.CycleBreaker.releaseCycleHandle(temp._objectref);\r
- }\r
- }\r
- } else if (temp._objectref != null)\r
- return false;\r
- if (this._id != null) {\r
- if (temp._id == null) return false;\r
- if (this._id != temp._id) {\r
- thcycle=org.castor.util.CycleBreaker.startingToCycle(this._id);\r
- tmcycle=org.castor.util.CycleBreaker.startingToCycle(temp._id);\r
- if (thcycle!=tmcycle) {\r
- if (!thcycle) { org.castor.util.CycleBreaker.releaseCycleHandle(this._id); };\r
- if (!tmcycle) { org.castor.util.CycleBreaker.releaseCycleHandle(temp._id); };\r
- return false;\r
- }\r
- if (!thcycle) {\r
- if (!this._id.equals(temp._id)) {\r
- org.castor.util.CycleBreaker.releaseCycleHandle(this._id);\r
- org.castor.util.CycleBreaker.releaseCycleHandle(temp._id);\r
- return false;\r
- }\r
- org.castor.util.CycleBreaker.releaseCycleHandle(this._id);\r
- org.castor.util.CycleBreaker.releaseCycleHandle(temp._id);\r
- }\r
- }\r
- } else if (temp._id != null)\r
- return false;\r
- return true;\r
+ }\r
+ if (!thcycle) {\r
+ if (!this._type.equals(temp._type)) {\r
+ org.castor.util.CycleBreaker.releaseCycleHandle(this._type);\r
+ org.castor.util.CycleBreaker.releaseCycleHandle(temp._type);\r
+ return false;\r
+ }\r
+ org.castor.util.CycleBreaker.releaseCycleHandle(this._type);\r
+ org.castor.util.CycleBreaker.releaseCycleHandle(temp._type);\r
+ }\r
}\r
+ } else if (temp._type != null)\r
return false;\r
- }\r
-\r
- /**\r
- * Returns the value of field 'compressed'. The field\r
- * 'compressed' has the following description: true implies\r
- * data will be decompresses with Zip\r
- * before presenting to application \r
- * \r
- * @return the value of field 'Compressed'.\r
- */\r
- public boolean getCompressed(\r
- ) {\r
- return this._compressed;\r
- }\r
-\r
- /**\r
- * Returns the value of field 'id'. The field 'id' has the\r
- * following description: Primary Key for vamsas object\r
- * referencing\r
- * \r
- * \r
- * @return the value of field 'Id'.\r
- */\r
- public java.lang.String getId(\r
- ) {\r
- return this._id;\r
- }\r
-\r
- /**\r
- * Returns the value of field 'objectref'. The field\r
- * 'objectref' has the following description: Object the\r
- * arbitrary data is associated with\r
- * \r
- * \r
- * @return the value of field 'Objectref'.\r
- */\r
- public java.lang.Object getObjectref(\r
- ) {\r
- return this._objectref;\r
- }\r
-\r
- /**\r
- * Returns the value of field 'type'. The field 'type' has the\r
- * following description: Type of arbitrary data - TODO: decide\r
- * format - use\r
- * (extended) MIME types ? \r
- * \r
- * @return the value of field 'Type'.\r
- */\r
- public java.lang.String getType(\r
- ) {\r
- return this._type;\r
- }\r
-\r
- /**\r
- * Method hasCompressed.\r
- * \r
- * @return true if at least one Compressed has been added\r
- */\r
- public boolean hasCompressed(\r
- ) {\r
- return this._has_compressed;\r
- }\r
-\r
- /**\r
- * Overrides the java.lang.Object.hashCode method.\r
- * <p>\r
- * The following steps came from <b>Effective Java Programming\r
- * Language Guide</b> by Joshua Bloch, Chapter 3\r
- * \r
- * @return a hash code value for the object.\r
- */\r
- public int hashCode(\r
- ) {\r
- int result = super.hashCode();\r
- \r
- long tmp;\r
- result = 37 * result + (_compressed?0:1);\r
- if (_type != null\r
- && !org.castor.util.CycleBreaker.startingToCycle(_type)) {\r
- result = 37 * result + _type.hashCode();\r
- org.castor.util.CycleBreaker.releaseCycleHandle(_type);\r
- }\r
- if (_objectref != null\r
- && !org.castor.util.CycleBreaker.startingToCycle(_objectref)) {\r
- result = 37 * result + _objectref.hashCode();\r
- org.castor.util.CycleBreaker.releaseCycleHandle(_objectref);\r
- }\r
- if (_id != null\r
- && !org.castor.util.CycleBreaker.startingToCycle(_id)) {\r
- result = 37 * result + _id.hashCode();\r
- org.castor.util.CycleBreaker.releaseCycleHandle(_id);\r
+ if (this._objectref != null) {\r
+ if (temp._objectref == null)\r
+ return false;\r
+ if (this._objectref != temp._objectref) {\r
+ thcycle = org.castor.util.CycleBreaker\r
+ .startingToCycle(this._objectref);\r
+ tmcycle = org.castor.util.CycleBreaker\r
+ .startingToCycle(temp._objectref);\r
+ if (thcycle != tmcycle) {\r
+ if (!thcycle) {\r
+ org.castor.util.CycleBreaker.releaseCycleHandle(this._objectref);\r
+ }\r
+ ;\r
+ if (!tmcycle) {\r
+ org.castor.util.CycleBreaker.releaseCycleHandle(temp._objectref);\r
+ }\r
+ ;\r
+ return false;\r
+ }\r
+ if (!thcycle) {\r
+ if (!this._objectref.equals(temp._objectref)) {\r
+ org.castor.util.CycleBreaker.releaseCycleHandle(this._objectref);\r
+ org.castor.util.CycleBreaker.releaseCycleHandle(temp._objectref);\r
+ return false;\r
+ }\r
+ org.castor.util.CycleBreaker.releaseCycleHandle(this._objectref);\r
+ org.castor.util.CycleBreaker.releaseCycleHandle(temp._objectref);\r
+ }\r
}\r
- \r
- return result;\r
- }\r
-\r
- /**\r
- * Returns the value of field 'compressed'. The field\r
- * 'compressed' has the following description: true implies\r
- * data will be decompresses with Zip\r
- * before presenting to application \r
- * \r
- * @return the value of field 'Compressed'.\r
- */\r
- public boolean isCompressed(\r
- ) {\r
- return this._compressed;\r
- }\r
-\r
- /**\r
- * Method isValid.\r
- * \r
- * @return true if this object is valid according to the schema\r
- */\r
- public boolean isValid(\r
- ) {\r
- try {\r
- validate();\r
- } catch (org.exolab.castor.xml.ValidationException vex) {\r
+ } else if (temp._objectref != null)\r
+ return false;\r
+ if (this._id != null) {\r
+ if (temp._id == null)\r
+ return false;\r
+ if (this._id != temp._id) {\r
+ thcycle = org.castor.util.CycleBreaker.startingToCycle(this._id);\r
+ tmcycle = org.castor.util.CycleBreaker.startingToCycle(temp._id);\r
+ if (thcycle != tmcycle) {\r
+ if (!thcycle) {\r
+ org.castor.util.CycleBreaker.releaseCycleHandle(this._id);\r
+ }\r
+ ;\r
+ if (!tmcycle) {\r
+ org.castor.util.CycleBreaker.releaseCycleHandle(temp._id);\r
+ }\r
+ ;\r
return false;\r
+ }\r
+ if (!thcycle) {\r
+ if (!this._id.equals(temp._id)) {\r
+ org.castor.util.CycleBreaker.releaseCycleHandle(this._id);\r
+ org.castor.util.CycleBreaker.releaseCycleHandle(temp._id);\r
+ return false;\r
+ }\r
+ org.castor.util.CycleBreaker.releaseCycleHandle(this._id);\r
+ org.castor.util.CycleBreaker.releaseCycleHandle(temp._id);\r
+ }\r
}\r
- return true;\r
- }\r
-\r
- /**\r
- * \r
- * \r
- * @param out\r
- * @throws org.exolab.castor.xml.MarshalException if object is\r
- * null or if any SAXException is thrown during marshaling\r
- * @throws org.exolab.castor.xml.ValidationException if this\r
- * object is an invalid instance according to the schema\r
- */\r
- public void marshal(\r
- final java.io.Writer out)\r
- throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException {\r
- Marshaller.marshal(this, out);\r
- }\r
-\r
- /**\r
- * \r
- * \r
- * @param handler\r
- * @throws java.io.IOException if an IOException occurs during\r
- * marshaling\r
- * @throws org.exolab.castor.xml.ValidationException if this\r
- * object is an invalid instance according to the schema\r
- * @throws org.exolab.castor.xml.MarshalException if object is\r
- * null or if any SAXException is thrown during marshaling\r
- */\r
- public void marshal(\r
- final org.xml.sax.ContentHandler handler)\r
- throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException {\r
- Marshaller.marshal(this, handler);\r
- }\r
-\r
- /**\r
- * Sets the value of field 'compressed'. The field 'compressed'\r
- * has the following description: true implies data will be\r
- * decompresses with Zip\r
- * before presenting to application \r
- * \r
- * @param compressed the value of field 'compressed'.\r
- */\r
- public void setCompressed(\r
- final boolean compressed) {\r
- this._compressed = compressed;\r
- this._has_compressed = true;\r
- }\r
-\r
- /**\r
- * Sets the value of field 'id'. The field 'id' has the\r
- * following description: Primary Key for vamsas object\r
- * referencing\r
- * \r
- * \r
- * @param id the value of field 'id'.\r
- */\r
- public void setId(\r
- final java.lang.String id) {\r
- this._id = id;\r
+ } else if (temp._id != null)\r
+ return false;\r
+ return true;\r
}\r
-\r
- /**\r
- * Sets the value of field 'objectref'. The field 'objectref'\r
- * has the following description: Object the arbitrary data is\r
- * associated with\r
- * \r
- * \r
- * @param objectref the value of field 'objectref'.\r
- */\r
- public void setObjectref(\r
- final java.lang.Object objectref) {\r
- this._objectref = objectref;\r
+ return false;\r
+ }\r
+\r
+ /**\r
+ * Returns the value of field 'compressed'. The field 'compressed' has the\r
+ * following description: true implies data will be decompresses with Zip\r
+ * before presenting to application\r
+ * \r
+ * @return the value of field 'Compressed'.\r
+ */\r
+ public boolean getCompressed() {\r
+ return this._compressed;\r
+ }\r
+\r
+ /**\r
+ * Returns the value of field 'id'. The field 'id' has the following\r
+ * description: Primary Key for vamsas object referencing\r
+ * \r
+ * \r
+ * @return the value of field 'Id'.\r
+ */\r
+ public java.lang.String getId() {\r
+ return this._id;\r
+ }\r
+\r
+ /**\r
+ * Returns the value of field 'objectref'. The field 'objectref' has the\r
+ * following description: Object the arbitrary data is associated with\r
+ * \r
+ * \r
+ * @return the value of field 'Objectref'.\r
+ */\r
+ public java.lang.Object getObjectref() {\r
+ return this._objectref;\r
+ }\r
+\r
+ /**\r
+ * Returns the value of field 'type'. The field 'type' has the following\r
+ * description: Type of arbitrary data - TODO: decide format - use (extended)\r
+ * MIME types ?\r
+ * \r
+ * @return the value of field 'Type'.\r
+ */\r
+ public java.lang.String getType() {\r
+ return this._type;\r
+ }\r
+\r
+ /**\r
+ * Method hasCompressed.\r
+ * \r
+ * @return true if at least one Compressed has been added\r
+ */\r
+ public boolean hasCompressed() {\r
+ return this._has_compressed;\r
+ }\r
+\r
+ /**\r
+ * Overrides the java.lang.Object.hashCode method.\r
+ * <p>\r
+ * The following steps came from <b>Effective Java Programming Language\r
+ * Guide</b> by Joshua Bloch, Chapter 3\r
+ * \r
+ * @return a hash code value for the object.\r
+ */\r
+ public int hashCode() {\r
+ int result = super.hashCode();\r
+\r
+ long tmp;\r
+ result = 37 * result + (_compressed ? 0 : 1);\r
+ if (_type != null && !org.castor.util.CycleBreaker.startingToCycle(_type)) {\r
+ result = 37 * result + _type.hashCode();\r
+ org.castor.util.CycleBreaker.releaseCycleHandle(_type);\r
}\r
-\r
- /**\r
- * Sets the value of field 'type'. The field 'type' has the\r
- * following description: Type of arbitrary data - TODO: decide\r
- * format - use\r
- * (extended) MIME types ? \r
- * \r
- * @param type the value of field 'type'.\r
- */\r
- public void setType(\r
- final java.lang.String type) {\r
- this._type = type;\r
+ if (_objectref != null\r
+ && !org.castor.util.CycleBreaker.startingToCycle(_objectref)) {\r
+ result = 37 * result + _objectref.hashCode();\r
+ org.castor.util.CycleBreaker.releaseCycleHandle(_objectref);\r
}\r
-\r
- /**\r
- * Method unmarshal.\r
- * \r
- * @param reader\r
- * @throws org.exolab.castor.xml.MarshalException if object is\r
- * null or if any SAXException is thrown during marshaling\r
- * @throws org.exolab.castor.xml.ValidationException if this\r
- * object is an invalid instance according to the schema\r
- * @return the unmarshaled uk.ac.vamsas.objects.core.AppData\r
- */\r
- public static uk.ac.vamsas.objects.core.AppData unmarshal(\r
- final java.io.Reader reader)\r
- throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException {\r
- return (uk.ac.vamsas.objects.core.AppData) Unmarshaller.unmarshal(uk.ac.vamsas.objects.core.Attachment.class, reader);\r
+ if (_id != null && !org.castor.util.CycleBreaker.startingToCycle(_id)) {\r
+ result = 37 * result + _id.hashCode();\r
+ org.castor.util.CycleBreaker.releaseCycleHandle(_id);\r
}\r
\r
- /**\r
- * \r
- * \r
- * @throws org.exolab.castor.xml.ValidationException if this\r
- * object is an invalid instance according to the schema\r
- */\r
- public void validate(\r
- )\r
- throws org.exolab.castor.xml.ValidationException {\r
- org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator();\r
- validator.validate(this);\r
+ return result;\r
+ }\r
+\r
+ /**\r
+ * Returns the value of field 'compressed'. The field 'compressed' has the\r
+ * following description: true implies data will be decompresses with Zip\r
+ * before presenting to application\r
+ * \r
+ * @return the value of field 'Compressed'.\r
+ */\r
+ public boolean isCompressed() {\r
+ return this._compressed;\r
+ }\r
+\r
+ /**\r
+ * Method isValid.\r
+ * \r
+ * @return true if this object is valid according to the schema\r
+ */\r
+ public boolean isValid() {\r
+ try {\r
+ validate();\r
+ } catch (org.exolab.castor.xml.ValidationException vex) {\r
+ return false;\r
}\r
+ return true;\r
+ }\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @param out\r
+ * @throws org.exolab.castor.xml.MarshalException\r
+ * if object is null or if any SAXException is thrown during\r
+ * marshaling\r
+ * @throws org.exolab.castor.xml.ValidationException\r
+ * if this object is an invalid instance according to the schema\r
+ */\r
+ public void marshal(final java.io.Writer out)\r
+ throws org.exolab.castor.xml.MarshalException,\r
+ org.exolab.castor.xml.ValidationException {\r
+ Marshaller.marshal(this, out);\r
+ }\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @param handler\r
+ * @throws java.io.IOException\r
+ * if an IOException occurs during marshaling\r
+ * @throws org.exolab.castor.xml.ValidationException\r
+ * if this object is an invalid instance according to the schema\r
+ * @throws org.exolab.castor.xml.MarshalException\r
+ * if object is null or if any SAXException is thrown during\r
+ * marshaling\r
+ */\r
+ public void marshal(final org.xml.sax.ContentHandler handler)\r
+ throws java.io.IOException, org.exolab.castor.xml.MarshalException,\r
+ org.exolab.castor.xml.ValidationException {\r
+ Marshaller.marshal(this, handler);\r
+ }\r
+\r
+ /**\r
+ * Sets the value of field 'compressed'. The field 'compressed' has the\r
+ * following description: true implies data will be decompresses with Zip\r
+ * before presenting to application\r
+ * \r
+ * @param compressed\r
+ * the value of field 'compressed'.\r
+ */\r
+ public void setCompressed(final boolean compressed) {\r
+ this._compressed = compressed;\r
+ this._has_compressed = true;\r
+ }\r
+\r
+ /**\r
+ * Sets the value of field 'id'. The field 'id' has the following description:\r
+ * Primary Key for vamsas object referencing\r
+ * \r
+ * \r
+ * @param id\r
+ * the value of field 'id'.\r
+ */\r
+ public void setId(final java.lang.String id) {\r
+ this._id = id;\r
+ }\r
+\r
+ /**\r
+ * Sets the value of field 'objectref'. The field 'objectref' has the\r
+ * following description: Object the arbitrary data is associated with\r
+ * \r
+ * \r
+ * @param objectref\r
+ * the value of field 'objectref'.\r
+ */\r
+ public void setObjectref(final java.lang.Object objectref) {\r
+ this._objectref = objectref;\r
+ }\r
+\r
+ /**\r
+ * Sets the value of field 'type'. The field 'type' has the following\r
+ * description: Type of arbitrary data - TODO: decide format - use (extended)\r
+ * MIME types ?\r
+ * \r
+ * @param type\r
+ * the value of field 'type'.\r
+ */\r
+ public void setType(final java.lang.String type) {\r
+ this._type = type;\r
+ }\r
+\r
+ /**\r
+ * Method unmarshal.\r
+ * \r
+ * @param reader\r
+ * @throws org.exolab.castor.xml.MarshalException\r
+ * if object is null or if any SAXException is thrown during\r
+ * marshaling\r
+ * @throws org.exolab.castor.xml.ValidationException\r
+ * if this object is an invalid instance according to the schema\r
+ * @return the unmarshaled uk.ac.vamsas.objects.core.AppData\r
+ */\r
+ public static uk.ac.vamsas.objects.core.AppData unmarshal(\r
+ final java.io.Reader reader)\r
+ throws org.exolab.castor.xml.MarshalException,\r
+ org.exolab.castor.xml.ValidationException {\r
+ return (uk.ac.vamsas.objects.core.AppData) Unmarshaller.unmarshal(\r
+ uk.ac.vamsas.objects.core.Attachment.class, reader);\r
+ }\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @throws org.exolab.castor.xml.ValidationException\r
+ * if this object is an invalid instance according to the schema\r
+ */\r
+ public void validate() throws org.exolab.castor.xml.ValidationException {\r
+ org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator();\r
+ validator.validate(this);\r
+ }\r
\r
}\r
git://source.jalview.org / vamsas.git / blobdiff