applied LGPLv3 and source code formatting.

[vamsas.git] / src / uk / ac / vamsas / objects / utils / GlyphDictionary.java

diff --git a/src/uk/ac/vamsas/objects/utils/GlyphDictionary.java b/src/uk/ac/vamsas/objects/utils/GlyphDictionary.java
index a49f4be..02a128e 100644 (file)
--- a/src/uk/ac/vamsas/objects/utils/GlyphDictionary.java
+++ b/src/uk/ac/vamsas/objects/utils/GlyphDictionary.java
@@ -1,23 +1,47 @@
+/*\r
+ * This file is part of the Vamsas Client version 0.1. \r
+ * Copyright 2009 by Jim Procter, Iain Milne, Pierre Marguerite, \r
+ *  Andrew Waterhouse and Dominik Lindner.\r
+ * \r
+ * Earlier versions have also been incorporated into Jalview version 2.4 \r
+ * since 2008, and TOPALi version 2 since 2007.\r
+ * \r
+ * The Vamsas Client is free software: you can redistribute it and/or modify\r
+ * it under the terms of the GNU Lesser General Public License as published by\r
+ * the Free Software Foundation, either version 3 of the License, or\r
+ * (at your option) any later version.\r
+ *  \r
+ * The Vamsas Client is distributed in the hope that it will be useful,\r
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of\r
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the\r
+ * GNU Lesser General Public License for more details.\r
+ * \r
+ * You should have received a copy of the GNU Lesser General Public License\r
+ * along with the Vamsas Client.  If not, see <http://www.gnu.org/licenses/>.\r
+ */\r
 package uk.ac.vamsas.objects.utils;\r
 \r
 /**\r
- * dict attribute values for glyph symbol sets found in uk.ac.vamsas.objects.core.AnnotationElement\r
- * TODO: add validators and multilength symbols.\r
+ * dict attribute values for glyph symbol sets found in\r
+ * uk.ac.vamsas.objects.core.AnnotationElement TODO: add validators and\r
+ * multilength symbols.\r
+ * \r
  * @author JimP\r
- *\r
+ * \r
  */\r
 public class GlyphDictionary {\r
   /**\r
    * standard H, E, or C three state secondary structure assignment.\r
    */\r
-  static final public String PROTEIN_SS_3STATE="aasecstr_3"; // HE, blank or C\r
+  static final public String PROTEIN_SS_3STATE = "aasecstr_3"; // HE, blank or C\r
+\r
   /**\r
    * default glyph type attribute indicates a UTF8 character\r
    */\r
-  static final public String DEFAULT="utf8";\r
+  static final public String DEFAULT = "utf8";\r
+\r
   /**\r
-   * kyte and doolittle hydrophobicity\r
-   * TODO: specify this glyph set.\r
+   * kyte and doolittle hydrophobicity TODO: specify this glyph set.\r
    */\r
-  static final public String PROTEIN_HD_HYDRO="kd_hydrophobicity";\r
+  static final public String PROTEIN_HD_HYDRO = "kd_hydrophobicity";\r
 }\r