X-Git-Url: http://source.jalview.org/gitweb/?p=vamsas.git;a=blobdiff_plain;f=src%2Fuk%2Fac%2Fvamsas%2Fobjects%2Futils%2FAppDataReference.java;h=db06fa675ba55d235424894b2137f52030100c0e;hp=b1cf4f26b00e57977d10ef5817e058a177615e1c;hb=374a49fcfd9a531459920a70e8b792f08c3d563d;hpb=bae4dff034be3e157850f6e8888e25d694e3b21a

diff --git a/src/uk/ac/vamsas/objects/utils/AppDataReference.java b/src/uk/ac/vamsas/objects/utils/AppDataReference.java
index b1cf4f2..db06fa6 100644
--- a/src/uk/ac/vamsas/objects/utils/AppDataReference.java
+++ b/src/uk/ac/vamsas/objects/utils/AppDataReference.java
@@ -146,13 +146,13 @@ public class AppDataReference {
    * @param entry base application reference to make unique 
    */
   public static String uniqueAppDataReference(VamsasDocument dest,String base) {
-    String urn = base.replace('/','.').replace('\\','.').replace(':', '_');
+    String urn = base.replace('/','_').replace('\\','_').replace(':', '_');
     int v = 1;
     for (int i=0, j=dest.getApplicationDataCount(); i<j; i++) {
       ApplicationData o = dest.getApplicationData()[i];
       // ensure new urn is really unique
       while (o.getDataReference()!=null && o.getDataReference().equals(urn)) {
-        urn = base+"."+v++;      
+        urn = base+"_"+v++;      
       } 
     }
     return urn;