From: jprocter <jprocter@compbio.dundee.ac.uk>
Date: Fri, 14 Sep 2007 13:40:24 +0000 (+0000)
Subject: set printRootInfo so root labels are not lost.
X-Git-Tag: Release_0.2~59
X-Git-Url: http://source.jalview.org/gitweb/?p=vamsas.git;a=commitdiff_plain;h=58cfc02bd5edea846480b0f893508baa2e48f05b

set printRootInfo so root labels are not lost.

git-svn-id: https://svn.lifesci.dundee.ac.uk/svn/repository/trunk@461 be28352e-c001-0410-b1a7-c7978e42abec
---

diff --git a/src/uk/ac/vamsas/objects/utils/trees/NewickFile.java b/src/uk/ac/vamsas/objects/utils/trees/NewickFile.java
index 4fd878c..d6f5f57 100644
--- a/src/uk/ac/vamsas/objects/utils/trees/NewickFile.java
+++ b/src/uk/ac/vamsas/objects/utils/trees/NewickFile.java
@@ -56,7 +56,7 @@ public class NewickFile {
   // File IO Flags
   boolean ReplaceUnderscores = true;
 
-  boolean printRootInfo = false;
+  boolean printRootInfo = true; // in case root has anything to preserve
 
   private Pattern[] NodeSafeName = new Pattern[] {
       Pattern.compile("[\\[,:'()]"), // test for requiring quotes