FishEye: Diff - jalview/utils/InstallAnywhere/README

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d5e758f

JAL-3065 - amended commit 4906697ab6e5a79fbce3baae89f7f64178c9a739 to exclude .settings/..groovy Added notes to the instructions, also adjusted the jalviewDesktopRunner test to lookup OS and use ';' or ':' accordingly. All the CommandLineOperations tests failed on my (hastily set up) linux box, so I'm committing and will test on MacOS too.

05 Sep 18 Jim Procter d5e758fa924437e30dc65b80a46cafcf4691da2f

4865a41

JAL-3065
Change in all repo documentation advising launching Jalview with the
-Djava.ext.dirs=LIB
option to now use
-classpath="LIB/*:..."
instead. Using the -Djava.ext.dirs= option masks the JRE's own ext dir
which contains the sunjce packages. This manifests as cipher problems
when accessing https resources (in particular https://www.ebi.ac.uk/...
when searching for PDB structures, activated when choosing Sequence->"3D
Structure Data...")

17 Jul 18 Ben Soares 4865a4110b7725acefd5b166f9b7c482ac01ce15

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