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JWS-112 Bumping version of ClustalW (src, binaries and windows) to version 2.1.

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Fixes for failed test cases (most was due to the data being used or problems with test cases themselves)

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@4303 e3abac25-378b-4346-85de-24260fe3988d

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Next version of JABA

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@2610 e3abac25-378b-4346-85de-24260fe3988d

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