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JWS-114 Bumping varied config files and jetbrains xmls. Also adding some java classes that are generated during the compilation.

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    ./AsyncJobRunner.java
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Refactoring (renaming) 2 classes: AsyncJobRunner.java -> AsyncClusterRunner.java and JobRunner.java -> ClusterRunner.java

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    ./AsyncClusterRunner.java
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    ./ClusterRunner.java
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Refactoring: rename duplicated Util classes

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    ./ClusterEngineUtil.java
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Improve coding style

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Improve coding style

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remove jabaws 3 development code

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Javadoc fixes

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@4508 e3abac25-378b-4346-85de-24260fe3988d

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Get rind of NativeClusterJob interface as pretty much every jobs best to use some cluster settings, and they are simply defined in the executable conf file and passed by the SkeletalExecutable.

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@4294 e3abac25-378b-4346-85de-24260fe3988d

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Next version of JABA

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@2610 e3abac25-378b-4346-85de-24260fe3988d

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    ./AsyncJobRunner.java
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    ./ClusterSession.java
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    ./StatisticManager.java
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    ./_DrmaaExample.java
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