jabaws/webservices/compbio/ws

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Thursday 18 May 2017
11:57 am

Fábio Madeira

JWS-112 Updated AACon to version 1.1.

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    ./Services.java
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Wednesday 12 Apr 2017
3:21 pm

Fábio Madeira

JWS-112 Updated the versions the tool versions that are shown in the ServiceStatus page

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    ./Services.java
Tuesday 28 Feb 2017
12:21 pm

Fábio Madeira

JWS-113 Commented Jpred entries in the datamodel, runner and webservices java source code.

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    ./Jws2Client.java
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    ./Services.java
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    ./ServicesUtil.java
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    ./WSTester.java
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Monday 14 Oct 2013
10:58 am

Sasha Sherstnev <a.sherstnev@dundee.ac.uk>

Define path to UNIREF database in conf/Executable.properties

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    ./Jws2Client.java
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Friday 04 Oct 2013
3:19 pm

Sasha Sherstnev <a.sherstnev@dundee.ac.uk>

Comment code for future options

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    ./Jws2Client.java
Monday 30 Sep 2013
2:31 pm

Sasha Sherstnev <a.sherstnev@dundee.ac.uk>

Remove still unsupported methods of RegistryWS

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    ./Jws2Client.java
2:29 pm

Sasha Sherstnev <a.sherstnev@dundee.ac.uk>

Bug Fixg: testing RNAalifold jobs have been considered as real ones

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    ./WSTester.java
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2:27 pm

Sasha Sherstnev <a.sherstnev@dundee.ac.uk>

Add Jabaws version string available in Services

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    ./Services.java
Thursday 26 Sep 2013
2:30 pm

Sasha Sherstnev <a.sherstnev@dundee.ac.uk>

Refactoring (renaming) 2 classes: AsyncJobRunner.java -> AsyncClusterRunner.java and JobRunner.java -> ClusterRunner.java

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    ./Jws2Client.java
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Tuesday 24 Sep 2013
5:35 pm

Sasha Sherstnev <a.sherstnev@dundee.ac.uk>

Assign JABAService.V2_SERVICE_NAMESPACE to all new services: JpredWS, RNAalifoldWS, MSAprobsWS, GLprobsWS

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    ./Services.java
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3:11 pm

Sasha Sherstnev <a.sherstnev@dundee.ac.uk>

Add all needed infrastructure for MSAprobs and GLprobs

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    ./Services.java
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    ./ServicesUtil.java
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Friday 20 Sep 2013
3:32 pm

Sasha Sherstnev <a.sherstnev@dundee.ac.uk>

Refactoring: rename duplicated Util classes

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    ./WSTester.java
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Thursday 19 Sep 2013
2:44 pm

Sasha Sherstnev <a.sherstnev@dundee.ac.uk>

JWS-17 re-design behaviour of Option.toString

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    ./MetadataHelper.java
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1:46 pm

Sasha Sherstnev <a.sherstnev@dundee.ac.uk>

JWS-17: fix problem with undefined URL for the furtherDetails tag

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    ./Jws2Client.java
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    ./MetadataHelper.java
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Tuesday 17 Sep 2013
3:35 pm

Sasha Sherstnev <a.sherstnev@dundee.ac.uk>

Final fixing of Jpred problem with casting

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    ./Jws2Client.java
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11:22 am

Sasha Sherstnev <a.sherstnev@dundee.ac.uk>

Clean up logging system

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    ./AAConClient.java
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    ./Jws2Client.java
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Monday 16 Sep 2013
3:17 pm

Sasha Sherstnev <a.sherstnev@dundee.ac.uk>

Re-design the ServiceStatus JSP page

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    ./Services.java
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3:16 pm

Sasha Sherstnev <a.sherstnev@dundee.ac.uk>

Define proper test for JpredWS

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    ./WSTester.java
Friday 13 Sep 2013
4:43 pm

Sasha Sherstnev <a.sherstnev@dundee.ac.uk>

Fix problem with wrong casting Alignment -> JpredAlignment

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    ./Jws2Client.java
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Wednesday 11 Sep 2013
5:13 pm

Sasha Sherstnev <a.sherstnev@dundee.ac.uk>

Fix problem with the JpredWS service. Now Jws2Client is able to test the service

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    ./Jws2Client.java
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Tuesday 10 Sep 2013
4:05 pm

Sasha Sherstnev <a.sherstnev@dundee.ac.uk>

Fix problem with unknown services ("forward" compatibility)

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    ./CmdHelper.java
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    ./Constraints.java
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    ./Jws2Client.java
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    ./Services.java
Friday 06 Sep 2013
5:23 pm

Sasha Sherstnev <a.sherstnev@dundee.ac.uk>

Merge branch 'JABAWS_Release_2_5' into develop

Conflicts:

.project

WEB-INF/sun-jaxws.xml

conf/Executable.properties

testsrc/compbio/data/sequence/SequenceUtilTester.java

webservices/compbio/data/msa/Category.java

webservices/compbio/ws/client/Jws2Client.java

webservices/compbio/ws/client/Services.java

webservices/compbio/ws/client/WSTester.java

webservices/compbio/ws/server/WSUtil.java

webservices/compbio/ws/server/resource/AAConWS.wsdl

webservices/compbio/ws/server/resource/AAConWS_schema1.xsd

webservices/compbio/ws/server/resource/ClustalWS.wsdl

webservices/compbio/ws/server/resource/ClustalWS_schema1.xsd

webservices/compbio/ws/server/resource/DisemblWS.wsdl

webservices/compbio/ws/server/resource/DisemblWS_schema1.xsd

webservices/compbio/ws/server/resource/GlobPlotWS.wsdl

webservices/compbio/ws/server/resource/GlobPlotWS_schema1.xsd

webservices/compbio/ws/server/resource/IUPredWS.wsdl

webservices/compbio/ws/server/resource/IUPredWS_schema1.xsd

webservices/compbio/ws/server/resource/JronnWS.wsdl

webservices/compbio/ws/server/resource/JronnWS_schema1.xsd

webservices/compbio/ws/server/resource/MafftWS.wsdl

webservices/compbio/ws/server/resource/MafftWS_schema1.xsd

webservices/compbio/ws/server/resource/MuscleWS.wsdl

webservices/compbio/ws/server/resource/MuscleWS_schema1.xsd

webservices/compbio/ws/server/resource/RegistryWS.wsdl

webservices/compbio/ws/server/resource/RegistryWS_schema1.xsd

webservices/compbio/ws/server/resource/TcoffeeWS.wsdl

webservices/compbio/ws/server/resource/TcoffeeWS_schema1.xsd

wsbuild.xml

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    ./Services.java
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    ./ServicesUtil.java
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    ./WSTester.java
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3:29 pm

Sasha Sherstnev <a.sherstnev@dundee.ac.uk>

Switch JpredWS from SequenceAnnotation to MsaWS

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    ./Services.java
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    ./WSTester.java
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10:29 am

Sasha Sherstnev <a.sherstnev@dundee.ac.uk>

Fix problem with test data for RNAalifold

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    ./WSTester.java
Thursday 05 Sep 2013
11:20 am

Sasha Sherstnev <a.sherstnev@dundee.ac.uk>

Roll back JpredWS JABAWS namespace: from V3 to V2. V3 will be a Matrix

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    ./Services.java
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11:19 am

Sasha Sherstnev <a.sherstnev@dundee.ac.uk>

Fix a bug with wrong namespace

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    ./Jws2Client.java
10:52 am

Sasha Sherstnev <a.sherstnev@dundee.ac.uk>

New version of the JABAWS client

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    ./Jws2Client.java
10:48 am

Sasha Sherstnev <a.sherstnev@dundee.ac.uk>

Add method for reporting JABAWS namespace

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    ./Services.java
10:46 am

Sasha Sherstnev <a.sherstnev@dundee.ac.uk>

Changes which allow JpredWS test

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    ./WSTester.java
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10:45 am

Sasha Sherstnev <a.sherstnev@dundee.ac.uk>

Improved help message

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    ./Constraints.java