jalview

Clone Tools

Stats

Commits this week: 5
Total Committers: 70
Last Commit:
Commits this week: 5

Lines of code count not available

Commit Activity

Commits By Day In Week
52 week commits volume
Commits By Day In Week
Commits by day
Commits By Day In Week
Commits by hour
Commits By Hour In Day
Commit calendar
 

Most active committers (90 days)

loading
loading
  • last updated a few seconds ago
All Commits Reviews
Constraints
Constraints: committers
 
Constraints: files
Constraints: dates
Wednesday 21 Oct 2020
2:54 pm

Mateusz Warowny

JAL-3690 Catch and notify about worker cancellation separately.

Options
    • -0
    • +1
    /src/jalview/api/AlignCalcListener.java
    • -0
    • +17
    /src/jalview/workers/AlignCalcManager2.java
2:51 pm

Mateusz Warowny

JAL-3690 Fix concurrent modification exception when workers are cancelled

Options
    • -26
    • +32
    /src/jalview/workers/AlignCalcManager2.java
2:45 pm

Mateusz Warowny

JAL-3690 Documentation for AlignCalcManagerI2

Options
    • -0
    • +88
    /src/jalview/api/AlignCalcManagerI2.java
Tuesday 20 Oct 2020
5:23 pm

Jim Procter

JAL-3765 fix test

Options
    • -0
    • +13
    /test/jalview/analysis/FinderTest.java
5:23 pm

Jim Procter

JAL-3765 fix test

Options
    • -10
    • +13
    /test/jalview/analysis/FinderTest.java
5:13 pm

Jim Procter

fix for JAL-3765

Options
    • -1
    • +1
    /src/jalview/analysis/Finder.java
5:13 pm

Jim Procter

fix for JAL-3765

Options
    • -1
    • +1
    /src/jalview/analysis/Finder.java
Monday 19 Oct 2020
6:07 pm

Jim Procter

JAL-3765 simple test that findAll finds all matches for a pattern when it is present multiple times in a sequence

Options
    • -0
    • +10
    /test/jalview/analysis/FinderTest.java
11:59 am

Jim Procter

not related to JAL-3765 ! Actually related to JAL-3675!

not related to JAL-3765 ! Actually related to JAL-3675!

Thursday 15 Oct 2020
3:01 pm

Ben Soares

Merge branch 'develop' into blocker/JAL-3611_space_character_in_jalview_install_path

Options
11:02 am

gmungoc <g.m.carstairs@dundee.ac.uk>

JAL-3763 unused method removed

Options
    • -34
    • +0
    /src/jalview/datamodel/AlignedCodonFrame.java
Thursday 08 Oct 2020
3:30 pm

gmungoc <g.m.carstairs@dundee.ac.uk>

JAL-3700 JAL-3763 create datasets for test sequences

Options
    • -4
    • +8
    /test/jalview/util/MappingUtilsTest.java
3:30 pm

gmungoc <g.m.carstairs@dundee.ac.uk>

JAL-3700 JAL-3763 create datasets for test sequences

Options
    • -4
    • +8
    /test/jalview/util/MappingUtilsTest.java
3:29 pm

gmungoc <g.m.carstairs@dundee.ac.uk>

JAL-3763 failsafe check for null

Options
    • -0
    • +4
    /src/jalview/datamodel/AlignedCodonFrame.java
3:29 pm

gmungoc <g.m.carstairs@dundee.ac.uk>

JAL-3763 failsafe check for null

Options
    • -0
    • +4
    /src/jalview/datamodel/AlignedCodonFrame.java
3:06 pm

gmungoc <g.m.carstairs@dundee.ac.uk>

JAL-3763 refactored getCoveringMapping for virtual feature discovery

Options
    • -25
    • +65
    /src/jalview/datamodel/AlignedCodonFrame.java
    • -7
    • +7
    /src/jalview/viewmodel/seqfeatures/FeatureRendererModel.java
3:06 pm

gmungoc <g.m.carstairs@dundee.ac.uk>

JAL-3763 refactored getCoveringMapping for virtual feature discovery

Options
    • -25
    • +65
    /src/jalview/datamodel/AlignedCodonFrame.java
    • -7
    • +7
    /src/jalview/viewmodel/seqfeatures/FeatureRendererModel.java
3:05 pm

gmungoc <g.m.carstairs@dundee.ac.uk>

JAL-3763 always make a new dataset sequence for CDS sequence

Options
    • -55
    • +41
    /src/jalview/analysis/AlignmentUtils.java
3:05 pm

gmungoc <g.m.carstairs@dundee.ac.uk>

JAL-3763 always make a new dataset sequence for CDS sequence

Options
    • -55
    • +41
    /src/jalview/analysis/AlignmentUtils.java
8:40 am

gmungoc <g.m.carstairs@dundee.ac.uk>

JAL-3761 failing test, formatting, method renamed

Options
    • -18
    • +36
    /src/jalview/util/MapList.java
    • -8
    • +19
    /test/jalview/util/MapListTest.java
Friday 02 Oct 2020
11:44 am

Jim Procter

JAL-3762 check for !args || args=="" before overwriting

Options
    • -1
    • +1
    /src/jalview/util/Platform.java
11:09 am

Jim Procter

JAL-3762 more typo fixing :q

Options
    • -3
    • +3
    /src/jalview/util/Platform.java
10:55 am

Jim Procter

JAL-3762 syntax error typo

Options
    • -1
    • +1
    /src/jalview/util/Platform.java
9:21 am

Jim Procter

JAL-3762 check if Info.args already defined before overwriting it with URL args. Also stashes URL args at Info.urlargs

Options
    • -11
    • +14
    /src/jalview/util/Platform.java
Thursday 01 Oct 2020
12:42 pm

gmungoc <g.m.carstairs@dundee.ac.uk>

JAL-3761 failing tests for locateInFrom/To with overlapping ranges

Options
    • -0
    • +53
    /test/jalview/util/MapListTest.java
Tuesday 29 Sep 2020
4:41 pm

Jim Procter

JAL-3760 fix tests for changed behaviour

Options
    • -4
    • +4
    /test/jalview/util/ComparisonTest.java
4:41 pm

Jim Procter

JAL-3760 fix tests for changed behaviour

Options
    • -4
    • +4
    /test/jalview/util/ComparisonTest.java
3:26 pm

Jim Procter

JAL-3760 refactor nucleotide proportion test to per-sequence and return false if any sequence appears protein-like

Options
    • -30
    • +39
    /src/jalview/util/Comparison.java
3:26 pm

Jim Procter

JAL-3760 refactor nucleotide proportion test to per-sequence and return false if any sequence appears protein-like

Options
    • -30
    • +39
    /src/jalview/util/Comparison.java
Monday 28 Sep 2020
4:57 pm

Ben Soares

JAL-3753 ensure correct dependencies for shadowJar task

Options
    • -24
    • +24
    /build.gradle