jalview

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Thursday 10 Dec 2020
5:50 pm

Jim Procter

JAL-3223 - update swingjs to 3.2.9-j11

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4:08 pm

gmungoc <g.m.carstairs@dundee.ac.uk>

JAL-3784 null the right overview reference when it is closed

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    /src/jalview/gui/AlignFrame.java
4:01 pm

gmungoc <g.m.carstairs@dundee.ac.uk>

JAL-1713 read/set OverviewPanel geometry on parent JInternalFrame

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    /src/jalview/project/Jalview2XML.java
3:53 pm

gmungoc <g.m.carstairs@dundee.ac.uk>

JAL-1713 save Overview title in project, don't save Overview on New View

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    /schemas/jalview.xsd
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    /src/jalview/project/Jalview2XML.java
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2:56 pm

gmungoc <g.m.carstairs@dundee.ac.uk>

JAL-3119 include view name (if any) in Overview title

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    /src/jalview/gui/AlignFrame.java
1:05 pm

gmungoc <g.m.carstairs@dundee.ac.uk>

JAL-1713 save/restore Overview in project (todo: restore geometry)

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    /src/jalview/project/Jalview2XML.java
1:04 pm

gmungoc <g.m.carstairs@dundee.ac.uk>

JAL-1713 refactorings to allow save/restore Overview to/from project

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    /src/jalview/gui/OverviewCanvas.java
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    /src/jalview/gui/OverviewPanel.java
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    /src/jalview/gui/Preferences.java
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    /src/jalview/renderer/OverviewResColourFinder.java
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    /test/jalview/renderer/OverviewRendererTest.java
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    /test/jalview/renderer/OverviewResColourFinderTest.java
1:02 pm

gmungoc <g.m.carstairs@dundee.ac.uk>

JAL-1713 schema and JAXB changes to save Overview in project file

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10:49 am

Ben Soares

JAL-3594 Documentation added to building.md for using the utils/channels/... folders

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    /doc/building.md
10:05 am

Ben Soares

Merge branch 'task/JAL-3594_updated--CHANNEL_cosmetics' into develop

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9:56 am

Ben Soares

Merge branch 'merge/develop_and_rebase_squashed_merge_JAL-3628+JAL-3608+JAL-3609+JAL-3541+Release_2_11_1_Branch' into develop

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    /build.gradle
Wednesday 09 Dec 2020
8:21 pm

Ben Soares

JAL-3594 Improved About banners for develop and test-release

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6:23 pm

Ben Soares

JAL-3594 Images for splash screen

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1:57 pm

Ben Soares

JAL-3594 JAL-3728 Added taskbar icons to desktop and Java console. Changed "Jalview" to "app_name" in various appropriate places

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    /src/jalview/util/ChannelProperties.java
Tuesday 08 Dec 2020
8:42 pm

Ben Soares

Merge branch 'merge/develop_and_rebase_squashed_merge_JAL-3628+JAL-3608+JAL-3609+JAL-3541+Release_2_11_1_Branch' into merge/JAL-3594_and_new_develop_issues

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    /src/jalview/gui/Desktop.java
6:17 pm

Ben Soares

JAL-3594 Change main window title

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    /utils/install4j/README-DMG_creation.md
12:56 am

Ben Soares

JAL-3594 DMG fixes

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Monday 07 Dec 2020
9:22 pm

Ben Soares

JAL-3594 added BG logo. Changed some named Jalviews to app_name property. Added test-release and default channels.

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1:29 pm

Ben Soares

JAL-3754 Fixed jar task creating strange dir because of outputs.file()

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    /build.gradle
1:29 pm

Ben Soares

JAL-3754 Fixed jar task creating strange dir because of outputs.file()

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    /build.gradle
Sunday 06 Dec 2020
1:36 pm

Jim Procter

Revert "JAL-3690 for a laugh, lets enable web services!"

This reverts commit 026057e76ba227a13968eb0ff3c01dc6b87145f4.

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1:35 pm

Jim Procter

JAL-3690 update to swingjs patch 3.2.9

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Saturday 05 Dec 2020
9:17 pm

Ben Soares

JAL-3594 Default values for channel properties defined in code as fallback

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11:54 am

gmungoc <g.m.carstairs@dundee.ac.uk>

JAL-3739 catch parameter errors and report to the user

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11:53 am

gmungoc <g.m.carstairs@dundee.ac.uk>

JAL-3739 validate input on tab out of field

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    /src/jalview/gui/OptsAndParamsPage.java
11:52 am

gmungoc <g.m.carstairs@dundee.ac.uk>

JAL-3739 always take input values from form fields (not defaults)

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    /src/jalview/ws/jws2/Jws2Client.java
11:52 am

gmungoc <g.m.carstairs@dundee.ac.uk>

JAL-3739 use logger to reduce debug output

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    /src/jalview/gui/WsJobParameters.java
Friday 04 Dec 2020
6:52 pm

Ben Soares

JAL-3594 Added rotating logo png

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6:31 pm

Ben Soares

JAL-3754 fixed a problem with jar task creating a stray dir when building

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5:59 pm

Ben Soares

JAL-3775 added the Platform.isLinux() check for test HiDPISetting2

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