jalview

Clone Tools
  • last updated a few seconds ago
Constraints
Constraints: committers
 
Constraints: files
Constraints: dates
JAL-3438 spotless for 2.11.2.0

    • -3
    • +3
    /src/com/stevesoft/pat/ChangeRule.java
    • -31
    • +31
    /src/com/stevesoft/pat/Ctrl.java
    • -4
    • +5
    /src/com/stevesoft/pat/FastBracket.java
    • -33
    • +28
    /src/com/stevesoft/pat/Regex.java
    • -2
    • +2
    /src/com/stevesoft/pat/RegexWriter.java
  1. … 647 more files in changeset.
Merge branch 'develop' into releases/Release_2_11_2_Branch

JAL-3746 JAL-3841 new README and finalising 2.11.2.0 release notes

JAL-3108 updated Ensembl client and model species names

JAL-3746 new release date for 2.11.2

JAL-3746 JAL-3103 java.awt.Desktop.showURL method mechanism release notes

Merge branch 'bug/JAL-3103_browser_launcher_problems_macos_and_linux' into develop

JAL-3878 Add web service reference to actions.

    • -7
    • +20
    /src/jalview/ws2/actions/BaseAction.java
    • -4
    • +12
    /src/jalview/ws2/actions/api/ActionI.java
    • -46
    • +39
    /src/jalview/ws2/api/WebService.java
JAL-3103 updated help doc to remove default browser choice

    • -1
    • +1
    /help/help/html/features/preferences.html
JAL-3103 Removed code and unused widgets for defaultBrowser

    • -53
    • +0
    /src/jalview/jbgui/GPreferences.java
JAL-3103 Remove BrowserLauncher2 and use Desktop.browse(url) with wrapper methods

    • -1
    • +1
    /resources/lang/Messages_es.properties
    • -33
    • +54
    /src/jalview/util/BrowserLauncher.java
JAL-3103 add BrowserLauncher2 LGPLv2.1 to THIRDPARTYLIBS

JAL-3103 Put jalview.jar first in getdown for .properties files. Remove now-not-needed exception handling from jalview code for openURL. Change Default browser input to JComboBox populated by BrowserLauncher2

    • -1
    • +1
    /resources/lang/Messages_es.properties
    • -49
    • +73
    /src/jalview/gui/StructureViewerBase.java
    • -9
    • +21
    /src/jalview/jbgui/GPreferences.java
    • -19
    • +36
    /src/jalview/util/BrowserLauncher.java
Merge branch 'develop' into releases/Release_2_11_2_Branch

JAL-3647 release notes for JAL-1842 JAL-3509 JAL-3881, JAL-3884 JAL-3632 JAL-3633 and report JAL-3764 as a known issue

JAL-3685 - two single quotes when replacements are present in i18n message

    • -10
    • +10
    /resources/lang/Messages.properties
JAL-3103 Switched to (a wrapper around) BrowserLauncher2

    • binary
    /j11lib/BrowserLauncher2-1_3.jar
    • binary
    /j8lib/BrowserLauncher2-1_3.jar
    • -0
    • +2
    /resources/lang/Messages_es.properties
    • -32
    • +43
    /src/jalview/gui/Preferences.java
    • -924
    • +26
    /src/jalview/util/BrowserLauncher.java
Merge branch 'develop' into releases/Release_2_11_2_Branch

JAL-3647 release notes for hdpi/laf scaling JAL-3608 JAL-3609 JAL-3552

JAL-3746 structure mapping preference docs for JAL-3817

    • -0
    • +7
    /help/help/html/features/preferences.html
Merge branch 'develop' into releases/Release_2_11_2_Branch

JAL-3608 JAL-3830 tweaked the what’s new text and updated helpTOC

Merge branch 'develop' into releases/Release_2_11_2_Branch

JAL-3608 JAL-3830 simplified command line docs a bit

    • -26
    • +51
    /help/help/html/features/commandline.html
Merge branch 'doc/JAL-3608+JAL-3830_added_to_help_docs' into develop

JAL-3830 added command line to whatsnew and releases

JAL-3830 Added new command line usage to docs

    • -10
    • +87
    /help/help/html/features/commandline.html
JAL-3878 Change visibility of WebService methods to public.

JAL-3608 added to LaF documentation

    • -1
    • +4
    /help/help/html/features/commandline.html
JAL-3830 fix broken/buggy install4j9 setting of executeSetupApp=false still running setupApp