Activity jalview/build.gradle

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Total Committers:	7
Last Commit:	17 Sep
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Friday 17 Sep

4:38 pm

Jim Procter <j.procter@dundee.ac.uk>

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f2134a9
changed 6 files
JAL-3416_different_look_and_feel_on_linux, bug/JAL-3885_sequence_fetched_not_displaying_PFAM_Seed and 9 more

JAL-3874 - replace Jmol with custom build of 14.31.53 from Jmol-SwingJS GitHub repo

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1:05 pm

Ben Soares

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9a3fbb9
changed 3 files
feature/JAL-3874_add_source_jars_to_eclipse

JAL-3874 attempt to add source jars to eclipse through buildship

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Thursday 16 Sep

2:00 pm

Jim Procter <j.procter@dundee.ac.uk>

JAL-3871 replaced Jmol with zip -F version fo Jmol and added excludeDuplicates flags to build.gradle

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Wednesday 15 Sep

7:52 am

Jim Procter

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CR-JAL-251
Abandoned

Wednesday 21 Jul

12:50 pm

Ben Soares

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27eec01
changed 1 file
JAL-3416_different_look_and_feel_on_linux, bug/JAL-3850_gradle_7_build_failure_no_SimpleHttpFileServerFactory and 18 more

JAL-3850 fixed full class name

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/build.gradle

12:32 pm

Ben Soares

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bec6abe
changed 1 file
JAL-3416_different_look_and_feel_on_linux, bug/JAL-3850_gradle_7_build_failure_no_SimpleHttpFileServerFactory and 18 more

JAL-3850 using reflection for SimpleHttpFileServerFactory

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/build.gradle

Wednesday 30 Jun

1:32 pm

Jim Procter <j.procter@dundee.ac.uk>

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f60095e
changed 1 file
improvement/JAL-3848_slivka_0.8_updated_jslib

JAL-3847 set default behaviour as exclude when dealing with duplicate entries in jars and zips

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/build.gradle

1:32 pm

Jim Procter <j.procter@dundee.ac.uk>

JAL-3847 set default behaviour as exclude when dealing with duplicate entries in jars and zips

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/build.gradle
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/build.gradle

Tuesday 08 Jun

5:11 pm

Ben Soares

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c1c19b3
changed 1 file
JAL-3416_different_look_and_feel_on_linux, bug/JAL-3850_gradle_7_build_failure_no_SimpleHttpFileServerFactory and 21 more

Merge branch 'develop' into improvement/JAL-3830_macOS_bundle_wrapper

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/build.gradle

Monday 26 Apr

5:56 pm

Ben Soares

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ce1298a
changed 1 file
patch/JAL-3840_2_11_1_4, patch/JAL-3847_gradleV7andV8Patches, releases/Release_2_11_1_Branch

JAL-3743 Fixed NullPointerExceptions happening with linkCheck task when gradle >= 6.6

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/build.gradle

5:56 pm

Ben Soares

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8dcb349
changed 1 file
improvement/JAL-3848_slivka_0.8_updated_jslib

JAL-3743 JAL-3745 Fixed NullPointerExceptions happening with linkCheck and jalviewjsTranspile tasks when gradle >= 6.6

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/build.gradle

5:56 pm

Ben Soares

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10e125b
changed 1 file
JAL-3416_different_look_and_feel_on_linux, bug/JAL-3850_gradle_7_build_failure_no_SimpleHttpFileServerFactory and 21 more

JAL-3743 JAL-3745 Fixed NullPointerExceptions happening with linkCheck and jalviewjsTranspile tasks when gradle >= 6.6

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/build.gradle

Wednesday 31 Mar

11:16 pm

Ben Soares

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7894f6f
changed 4 files
JAL-3416_different_look_and_feel_on_linux, bug/JAL-3850_gradle_7_build_failure_no_SimpleHttpFileServerFactory and 21 more

JAL-3830 BAT file wrapper around powershell, so jalview works in command prompt. Added install4j option for installer to add Jalview's bin dir to Path in Windows. Added install4j option to create symlink to bash script to user's local bin (first of ~/bin, ~/.local/bin, ~/local/bin, ~/opt/bin that exists. First two of these usually automatically in PATH).

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Thursday 25 Mar

2:11 am

Ben Soares

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6b8b09f
changed 3 files
bug/JAL-3633_read_proxy_settings_from_jalview_properties_in_getdown

JAL-3633 getdown reads jalview_properties for proxy settings

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Wednesday 24 Mar

1:49 am

Ben Soares

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9e7c315
changed 7 files
JAL-3416_different_look_and_feel_on_linux, bug/JAL-3850_gradle_7_build_failure_no_SimpleHttpFileServerFactory and 21 more

JAL-3830 Moved wrappers to bin/jalview.* and make a symlink bin/jalview. Install4j script now jalviewg

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Friday 19 Mar

10:53 pm

Ben Soares

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726bda0
changed 21 files
bug/JAL-3633_read_proxy_settings_from_jalview_properties_in_getdown, improvement/JAL-3503_startup_preferences

JAL-3503 Added a Startup tab in Preferences, with gui for JVMMEMMAX and JVMMEMPC settings. Allowed jalview.bin.Launcher and getdown to read/use these memory settings at launch. Added channel.props to getdown appdir, used to determing correct .jalview_properties file. Refactored MemorySetting a bit, with more helper methods for the Preferences tab.

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Wednesday 17 Mar

9:06 pm

Ben Soares

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c278f1c
changed 6 files
JAL-3416_different_look_and_feel_on_linux, bug/JAL-3850_gradle_7_build_failure_no_SimpleHttpFileServerFactory and 21 more

JAL-3830 Now using a single universal bash script (jalviewc) for bash in linux, macos, cygwin and WSL. It keeps things together.

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12:30 am

Ben Soares

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33f9fc9
changed 3 files
JAL-3416_different_look_and_feel_on_linux, bug/JAL-3850_gradle_7_build_failure_no_SimpleHttpFileServerFactory and 21 more

JAL-3830 add the windows bash script to getdown files and install4j installers

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Friday 12 Mar

6:26 pm

Ben Soares

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9038c9b
changed 5 files
JAL-3416_different_look_and_feel_on_linux, bug/JAL-3850_gradle_7_build_failure_no_SimpleHttpFileServerFactory and 21 more

JAL-3830 improved bash scripts. Added powershell script. Needs testing

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1:09 am

Ben Soares

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fb2acff
changed 6 files
JAL-3416_different_look_and_feel_on_linux, bug/JAL-3850_gradle_7_build_failure_no_SimpleHttpFileServerFactory and 21 more

JAL-3830 unix and macos wrappers. Symbolic link to jalviewc-macos in Contents/MacOS/jalviewc.

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Wednesday 10 Mar

7:58 pm

Ben Soares

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e82c2d4
changed 3 files
JAL-3416_different_look_and_feel_on_linux, bug/JAL-3850_gradle_7_build_failure_no_SimpleHttpFileServerFactory and 21 more

JAL-3830 install4j adds script to Jalview.app/Contents/MacOS/jalview but we need install4j9 to make it executable

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Tuesday 02 Mar

8:50 pm

Ben Soares

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ec43e61
changed 3 files
improvement/JAL-3826_gradle_configuration_for_intellij_idea

JAL-3826 Simple configuration with CodeStyle implemented in .editorconfig file

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Wednesday 10 Feb

12:12 am

Ben Soares

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e6dea4b
changed 1 file
master, bug/JAL-3806_mappingCoversSequence and 4 more

JAL-3521 Changed wording of INSTALLATION in source tarball build_properties

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12:12 am

Ben Soares

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ddbbe4e
changed 1 file
JAL-3416_different_look_and_feel_on_linux, arnaud/develop and 27 more

JAL-3521 Changed wording of INSTALLATION in source tarball build_properties

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Monday 08 Feb

7:00 pm

Ben Soares

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cb575bd
changed 1 file
master, bug/JAL-3806_mappingCoversSequence and 4 more

JAL-3521 Adding a build_properties into sourceDist tarball, with INSTALLATION=SourceDist git-commit...

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7:00 pm

Ben Soares

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20b030b
changed 1 file
JAL-3416_different_look_and_feel_on_linux, arnaud/develop and 27 more

JAL-3521 Adding a build_properties into sourceDist tarball, with INSTALLATION=SourceDist git-commit...

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Saturday 06 Feb

1:51 am

Ben Soares

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daebef3
changed 2 files
master, bug/JAL-3806_mappingCoversSequence and 4 more

JAL-3521 Moved the debian build.gradle to utils/debian/build.gradle.debian

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Thursday 28 Jan

1:50 pm

Jalview Development Admin <jalview-dev-owner@jalview.org>

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cb0baa9
changed 2 files
JAL-3416_different_look_and_feel_on_linux, arnaud/develop and 28 more

Merge branch 'task/JAL-3805_Remove_Uninstall_Old_Jalview_application_for_develop_branch' into task/JAL-3796_notarization_no_uninstaller

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12:46 pm

Jalview Development Admin <jalview-dev-owner@jalview.org>

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e2962ae
changed 2 files
JAL-3416_different_look_and_feel_on_linux, arnaud/develop and 28 more

Merge branch 'develop' into task/JAL-3796_notarization_no_uninstaller

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12:42 pm

Jalview Development Admin <jalview-dev-owner@jalview.org>

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9e5f88c
changed 2 files
JAL-3416_different_look_and_feel_on_linux, bug/JAL-3523_cwd_not_preserved and 24 more

Merge branch 'develop' into task/JAL-3796_notarization

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