gradle.properties

Clone Tools
  • last updated a few seconds ago
Constraints
Constraints: committers
 
Constraints: files
Constraints: dates
JAL-3830 BAT file wrapper around powershell, so jalview works in command prompt. Added install4j option for installer to add Jalview's bin dir to Path in Windows. Added install4j option to create symlink to bash script to user's local bin (first of ~/bin, ~/.local/bin, ~/local/bin, ~/opt/bin that exists. First two of these usually automatically in PATH).

  1. … 3 more files in changeset.
JAL-3830 Moved wrappers to bin/jalview.* and make a symlink bin/jalview. Install4j script now jalviewg

  1. … 6 more files in changeset.
JAL-3503 Added a Startup tab in Preferences, with gui for JVMMEMMAX and JVMMEMPC settings. Allowed jalview.bin.Launcher and getdown to read/use these memory settings at launch. Added channel.props to getdown appdir, used to determing correct .jalview_properties file. Refactored MemorySetting a bit, with more helper methods for the Preferences tab.

  1. … 20 more files in changeset.
JAL-3830 Now using a single universal bash script (jalviewc) for bash in linux, macos, cygwin and WSL. It keeps things together.

  1. … 5 more files in changeset.
JAL-3830 add the windows bash script to getdown files and install4j installers

  1. … 2 more files in changeset.
JAL-3830 improved bash scripts. Added powershell script. Needs testing

  1. … 4 more files in changeset.
JAL-3830 unix and macos wrappers. Symbolic link to jalviewc-macos in Contents/MacOS/jalviewc.

  1. … 5 more files in changeset.
JAL-3830 install4j adds script to Jalview.app/Contents/MacOS/jalview but we need install4j9 to make it executable

  1. … 2 more files in changeset.
Merge branch 'develop' into task/JAL-3796_notarization_no_uninstaller

  1. … 1 more file in changeset.
Merge branch 'develop' into task/JAL-3796_notarization

  1. … 1 more file in changeset.
JAL-3796 update to Install4j 8.0.10 and add config for code notarization

  1. … 2 more files in changeset.
JAL-3789 Use j2s.config.altfileproperty in .j2s for alternative temporary build/jalviewjs/config/j2s settings file when running a headless build in gradle

  1. … 1 more file in changeset.
JAL-3789 Use j2s.config.altfileproperty in .j2s for alternative temporary build/jalviewjs/config/j2s settings file when running a headless build in gradle

  1. … 1 more file in changeset.
JAL-3789 First attempt for configurable property to look at

  1. … 4 more files in changeset.
JAL-3594 added BG logo. Changed some named Jalviews to app_name property. Added test-release and default channels.

  1. … 113 more files in changeset.
JAL-3594 New way for build.gradle to override properties with channel based properties files. Starting to tidy up some old image files

  1. … 75 more files in changeset.
Merge branch 'develop' into bug/JAL-3753_resources_duplicated_in_jalview_jar

  1. … 1 more file in changeset.
JAL-3577 Removed default JALVIEW_VERSION from gradle.properties. Now being set by build.gradle

JAL-3577 Removed default JALVIEW_VERSION from gradle.properties. Now being set by build.gradle

JAL-3577 Removed default JALVIEW_VERSION from gradle.properties. Now being set by build.gradle

JAL-3753 JAL-3754 first rejig

  1. … 1 more file in changeset.
JAL-3594 Different icon/getdown styling when launching jalview built with -PCHANNEL=DEVELOP

  1. … 45 more files in changeset.
JAL-3594 Different icon/getdown styling when launching jalview built with -PCHANNEL=DEVELOP

  1. … 45 more files in changeset.
JAL-3718 Added digestonly key to getdown.txt to copy file to alt or release when building, and to be included in the getdown digest. This key is completely ignored by the getdown-launcher. Looks in j8/j11digestonly.

  1. … 19 more files in changeset.
JAL-3390: Option to hide unmapped residues in structure viewer
JAL-3390: Option to hide unmapped residues in structure viewer
JAL-3658 Now only making cores from utils/jalviewjs/classlists/*.txt

  1. … 7 more files in changeset.
Merge branch 'develop' into feature/JAL-3390hideUnmappedStructure

Conflicts:

gradle.properties

resources/lang/Messages.properties

resources/lang/Messages_es.properties

src/jalview/api/structures/JalviewStructureDisplayI.java

src/jalview/appletgui/AppletJmol.java

src/jalview/ext/jmol/JalviewJmolBinding.java

src/jalview/ext/jmol/JmolCommands.java

src/jalview/ext/rbvi/chimera/AtomSpecModel.java

src/jalview/ext/rbvi/chimera/ChimeraCommands.java

src/jalview/ext/rbvi/chimera/JalviewChimeraBinding.java

src/jalview/gui/AlignFrame.java

src/jalview/gui/AlignmentPanel.java

src/jalview/gui/AppJmol.java

src/jalview/gui/ChimeraViewFrame.java

src/jalview/gui/JalviewChimeraBindingModel.java

src/jalview/gui/StructureViewerBase.java

src/jalview/structures/models/AAStructureBindingModel.java

test/jalview/ext/jmol/JmolCommandsTest.java

test/jalview/ext/rbvi/chimera/ChimeraCommandsTest.java

test/jalview/structures/models/AAStructureBindingModelTest.java

  1. … 23 more files in changeset.
JAL-3225 Removed dependency on command line pandoc to convert .md files to .html. Now all files in doc/*.md will get converted to doc/*.html using flexmark within gradle process.

  1. … 3 more files in changeset.
JAL-3225 Removed dependency on command line pandoc to convert .md files to .html. Now all files in doc/*.md will get converted to doc/*.html using flexmark within gradle process.

  1. … 3 more files in changeset.
JAL-3225 small fixes for building within Eclipse

  1. … 1 more file in changeset.