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Tuesday 21 Sep
9:59 pm

Jim Procter <j.procter@dundee.ac.uk>

JAL-3746 release notes and what’s new for 2.11.2 - in progress

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Thursday 16 Sep
6:07 pm

Ben Soares

JAL-3779 Added to documentation

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    ./help/html/features/annotationsFormat.html
Wednesday 15 Sep
4:19 pm

Jim Procter <j.procter@dundee.ac.uk>

JAL-3842 fix automatic what's new link for custom version builds

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4:17 pm

Jim Procter <j.procter@dundee.ac.uk>

JAL-3842 2.11.1.5 what’s new, release notes, and version bump Conflicts: RELEASE

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4:16 pm

Jim Procter <j.procter@dundee.ac.uk>

JAL-3816 bump version number and cut release notes

Conflicts:

RELEASE

doc/building.html

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4:11 pm

Jim Procter <j.procter@dundee.ac.uk>

JAL-3766 cut new patch release Conflicts: RELEASE

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4:10 pm

Jim Procter <j.procter@dundee.ac.uk>

JAL-3758 2.11.1.2 patch release notes and version bump Conflicts: RELEASE

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4:09 pm

Jim Procter <j.procter@dundee.ac.uk>

JAL-3741 http to https (and jar to jvp for exampleFile defaults!) Conflicts: src/jalview/bin/Jalview.java src/jalview/gui/Desktop.java

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4:00 pm

Jim Procter <j.procter@dundee.ac.uk>

JAL-3477 added help documentation for executable jar command line arguments -jvmmempc and -jvmmemmax

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3:56 pm

Jim Procter <j.procter@dundee.ac.uk>

JAL-3675 version update and documentation for JAL-3493 JAL-3680 JAL-3638 Conflicts: RELEASE

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3:55 pm

Jim Procter <j.procter@dundee.ac.uk>

JAL-3638 JAL-3680 fix docs for Alt + Arrow LRUD in cursor mode. help/help/html/keys.html

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Tuesday 13 Jul
11:45 am

Jim Procter <j.procter@dundee.ac.uk>

JAL-3842 fix automatic what's new link for custom version builds

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Wednesday 30 Jun
11:31 am

Jim Procter <j.procter@dundee.ac.uk>

JAL-3842 JAL-3746 (need to cherry pick to develop) - automatically generate link to latest release notes in what's new

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Wednesday 09 Jun
6:06 pm

Jim Procter

JAL-3842 2.11.1.5 what’s new, release notes, and version bump

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Tuesday 09 Mar
1:03 pm

Jim Procter

JAL-3816 release date updated to 9th March

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Friday 05 Mar
6:19 pm

Jim Procter

JAL-3816 release date set for 8th March and updated what's new

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5:44 pm

Jim Procter

JAL-3816 new known defects JAL-3705 and JAL-3806

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Thursday 04 Mar
11:39 am

Jim Procter

Revert "JAL-3816 release notes for JAL-3806"

This reverts commit ead40d75a04715c80c61e34e277bb995cb2bef90.

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Friday 26 Feb
3:02 pm

Jim Procter

JAL-3816 release notes for JAL-3806

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1:55 pm

Jim Procter

JAL-3816 JAL-3814 JAL-3813 JAL-3812 JAL-3811 JAL-3818 release notes and date for 2.11.1.4 release

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Sunday 07 Feb
4:06 pm

Jim Procter

JAL-3816 bump version number and cut release notes

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Friday 04 Dec 2020
5:35 pm

Ben Soares

Agreed. I seem to remember (this was a while ago now) that I found isAMacAndNotJS() and thought it might be an important distinction. Sounds like it's just redundant? Can tidy this another time then.

Agreed. I seem to remember (this was a while ago now) that I found isAMacAndNotJS() and thought it might be an important distinction. Sounds like it's just redundant? Can tidy this another time then.

5:31 pm

Ben Soares

Agree this is just touching on a much bigger task. However... The reason I /needed/ to do this rather than just /wanted/ to do this is that several of the classes I've been working on (e.g. jalview...

Agree this is just touching on a much bigger task.
However...
The reason I /needed/ to do this rather than just /wanted/ to do this is that several of the classes I've been working on (e.g. jalview.bin.Launcher, jalview.bin.HiDPISetting, jalview.bin.MemorySetting) run very early on (especially jalview.bin.Launcher!). This means Cache.log has perhaps not yet been initialised, so a Cache.log.debug doesn't log (unless you count reams of NullPointerExceptions as logging!).

In the case of HiDPISetting and MemorySetting that also get used in Getdown, where there is no jalview.bin.Cache, they currently have to use System.out and System.err [or maybe I could stub jalview.bin.Cache too]. I'd prefer them to use Cache.log when they can so this is an attempt at starting to decouple jalview.bin.Cache from other jalview things so it can be used standalone within Getdown. The main reason for wanting to do that is to have shared code to read the preferences between Jalview and Getdown.

Wednesday 02 Dec 2020
5:56 pm

Jim Procter

I think there are lots of things that could be tidied up (particularly the overloading and additional logging functions via Cache which don't really reduce code at point of use, but are certainly u...

I think there are lots of things that could be tidied up (particularly the overloading and additional logging functions via Cache which don't really reduce code at point of use, but are certainly useful in spirit), but now is most definitely not the time to optimise and beautify code.

5:53 pm

Jim Procter

Ben Soares as far as I can see the only thing missing after this branch is merged to develop is this logic. I just did a quick test and it appears 'Platform.isAMac()' returns false under JalviewJS,...

Ben Soares as far as I can see the only thing missing after this branch is merged to develop is this logic. I just did a quick test and it appears 'Platform.isAMac()' returns false under JalviewJS, so probably not a dealbreaker. Do you agree ?

5:20 pm

Jim Procter

JAL-3608 cherry pick of 92cb745e7
JAL-3608 cherry pick of 92cb745e7
Thursday 29 Oct 2020
8:01 pm

Jim Procter

JAL-3766 what’s new and release notes for 2.11.1.3

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3:20 pm

Jim Procter

JAL-3766 release notes for JAL-3759

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3:10 pm

Jim Procter

JAL-3766 release notes for JAL-3765 JAL-3763 JAL-3760 JAL-3751 JAL-3748 JAL-3725 JAL-3700 JAL-3611

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Wednesday 21 Oct 2020
4:24 pm

Jim Procter

JAL-3766 release notes for JAL-3611 JAL-3765

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