threedbeacons

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JAL-3829 open web page for 3d beacons structure by right-clicking and selecting pop up menu item

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JAL-3829 abstract essential TDB metadata from the user configurable data array displayed in the JTable

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    ./TDB_FTSData.java
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JAL-3829 throw the exception even if it has no message

JAL-3829 allow multiple URL mocks and include P01308 in 3d-beacons mocks

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JAL-3829 JalviewJS workarounds/patches

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JAL-3829 point at production 3d-beacons url

JAL-3829 mocking for PDBFTS for related query to UniprotFTS mock.

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JAL-3829 mocking for testing 3D-Beacons FTS endpoint

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JAL-3929 3d-beacons structure chooser logic (not yet finished)

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    ./TDBeaconsFTSRestClient.java
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JAL-3829 3d-beacons structure chooser logic (not yet finished)

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    • +105
    ./TDBeaconsFTSRestClient.java
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JAL-3829 proof in principle 3d-beacons sequence fetcher - still some TODOs !

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JAL-3929 proof in principle 3d-beacons sequence fetcher - still some TODOs !

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JAL-3829 fixed up the 3d-beacons data columns definitions, tests and client.

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JAL-3929 fixed up the 3d-beacons data columns definitions, tests and client.

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JAL-3829 removed unneeded attribute in FTS core

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JAL-3929 removed unneeded attribute in FTS core

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remove debugging printlns

remove debugging printlns

aim is normally to avoid creating query-specific data containers on the core query response class

aim is normally to avoid creating query-specific data containers on the core query response class

? not sure this is correct

? not sure this is correct

Needs additionally: model_category created sequence_identity uniprot_start uniprot_end resolution coverage qmean_version ? model_version

Needs additionally:
model_category
created
sequence_identity
uniprot_start
uniprot_end
resolution
coverage
qmean_version ?
model_version

Evaluate 3D-Beacons dev path based on Arnaud's ERASMUS+ project code
Evaluate 3D-Beacons dev path based on Arnaud's ERASMUS+ project code
JAL-3829 more testing wit tdbeacons data columns and FTSclient

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JAL-3829 attempt to fix my changes to follow the Jira issue

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fixed last commit

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Request now parses the whole structures, need to fix the result

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TDB.executeRequest fix & test passed

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Created 3Dbeacons data_columns.txt Test passed for data columns

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    ./TDBeaconsFTSRestClient.java
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added untracked parsing attempts files

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