threedbeacons

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JAL-3085 update tests and mock responses, new P0dtd1 testcase

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    ./p01308_tdb_fts_query_resp.txt
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    ./p0dtd1_pdbfts_fts_query_pt1.txt
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    ./p0dtd1_pdbfts_fts_query_pt1_resp.txt
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    ./p0dtd1_pdbfts_fts_query_pt2.txt
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    ./p0dtd1_pdbfts_fts_query_pt2_resp.txt
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    ./p0dtd1_pdbfts_fts_query_pt3.txt
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    ./p0dtd1_pdbfts_fts_query_pt3_resp.txt
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    ./p0dtd1_pdbfts_fts_query_pt4.txt
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    ./p0dtd1_pdbfts_fts_query_pt4_resp.txt
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    ./p0dtd1_tdb_fts_query_resp.txt
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    ./p38398_tdb_fts_query_resp.txt
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JAL-3976 fix mock PDBFTS query & responses

JAL-3976 update tests

JAL-3746 apply copyright to tests

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JAL-3438 spotless for 2.11.2.0

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    ./TDBeaconsFTSRestClientTest.java
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JAL-3438 - all src and test run through spotless..

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    ./TDBeaconsFTSRestClientTest.java
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JAL-3829 remove duplicate IDs in 3DBeacons generated PDBFTS query and update mocks

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    ./p01308_pdbfts_resp.txt
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JAL-3919 use model format field to ensure we get the file extension correct when creating temp files for structure viewers

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JAL-3829 updated response for P01308

JAL-3829 TDBeacons fetcher needs a sequence with at least one canonical uniprot accession

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JAL-3829 move mock query and responses to files

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    ./p01308_pdbfts_query.txt
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    ./p01308_pdbfts_resp.txt
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JAL-3829 allow multiple URL mocks and include P01308 in 3d-beacons mocks

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JAL-3829 update for v1.0 3d-beacons api spec

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JAL-3829 formatting

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    ./TDBeaconsFTSRestClientTest.java
JAL-3829 integration test verifying mock response is valid for a live server

JAL-3829 mocking for PDBFTS for related query to UniprotFTS mock.

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JAL-3829 mocking for testing 3D-Beacons FTS endpoint

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JAL-3929 updated tests for 3db fetcher’s working FTS metadata

JAL-3829 updated tests for 3db fetcher’s working FTS metadata

JAL-3829 fixed up the 3d-beacons data columns definitions, tests and client.

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JAL-3929 fixed up the 3d-beacons data columns definitions, tests and client.

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remove debugging printlns

remove debugging printlns

aim is normally to avoid creating query-specific data containers on the core query response class

aim is normally to avoid creating query-specific data containers on the core query response class

? not sure this is correct

? not sure this is correct

Needs additionally: model_category created sequence_identity uniprot_start uniprot_end resolution coverage qmean_version ? model_version

Needs additionally:
model_category
created
sequence_identity
uniprot_start
uniprot_end
resolution
coverage
qmean_version ?
model_version

Evaluate 3D-Beacons dev path based on Arnaud's ERASMUS+ project code
Evaluate 3D-Beacons dev path based on Arnaud's ERASMUS+ project code
JAL-3929_spike minor changes

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JAL-3829_spike minor changes

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