Jalview.iap_xml

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JAL-2976 typo in installAnywhere build for VAqua dependency

JAL-2976 Vaqua(4) as a dependency

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JAL-2069 spike updated with latest (FeatureTypeSettings)

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JAL-2698 only allow InstallAnywhere launches with version 1.8.* of java - java 9 JVM args not yet working for 2.10.3

JAL-2698 patch path for InstallAnywhere build. Webstart and source builds unchanged

JAL-2738 copy to spikes/mungo

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JAL-2675 update destination jar name of min-jabaws-client to 2.2

spike branch updated from latest features/JAL-2446

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JAL-2606 updated IA build for changed dependency due to JAL-2549

JAL-2325 JAL-1878 update minimum versions of JRE for running/installing on windows and OSX

JAL-2325 JAL-2273 update vms bound to different installers

JAL-2177 Jmol update from: Jmol-14.2.14_2015.06.11 to Jmol-14.6.4_2016.10.26

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JAL-2089 patch broken merge to master for Release 2.10.0b1

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JAL-2089 Merge branch releases/Release_2_10_Branch to master

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JAL-2030 - add servlet-api-3.1.jar to installAnywhere build

JAL-2074 reinstate upgrade to groovy 2.8.4-indy

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JAL-2074 backed out groovy upgrade - back to 1.8.2

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JAL-2074 updated groovy-all to 2.4.6-indy

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Merge branch 'develop' into features/JAL-653_JAL-1766_htslib_refseqsupport

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JAL-1894 update year/version in copyright

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JAL-1612 JAL-1439 JAL-1845 OSX Installers set Xdock:name=Jalview and Xdock:icon=<install path>/..icn file in launchAnywhere

JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensing glob

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JAL-1645 licencing for new files in test and utils

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JAL-1844 adding more missing jars - jersey, other json stuff, jsr311 and also jetty (for JAL-1575 JAL-1725)

fix for JAL-1844 add jersey-core,json,client-1.19 to install anywhere config

JAL-1807 merge from JAL-1759jmolUpdate

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JAL-1759 merge from develop

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JAL-1759 updated Jmol version in nbproject, install anywhere, THIRDPARTYLIBS, (but not yet appletParameters.html)

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JAL-892 jnlp, installAnywhere, build, licence references updated to 3.93

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JAL-1766 update HTSJDK to Version 1.133

  1. … 3 more files in changeset.