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JAL-3978 New tasks to build archive 'old' dir with appropriate getdown resources, JVL file and digest

  1. … 20 more files in changeset.
JAL-3594 Making default .jalview_properties file separate. Now .jalview_nonrelease_properties

JAL-3594 Allow a channel to use a different preferences file than .jalview_properties, with initial read from .jalview_properties

  1. … 6 more files in changeset.
JAL-3594 Adjustments to allow JalviewJS to use ChannelProperties, and new utils/channels dir for jalviewjs and jalviewjs-release

  1. … 50 more files in changeset.