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JAL-3594 Allow a channel to use a different preferences file than .jalview_properties, with initial read from .jalview_properties

  1. … 6 more files in changeset.
JAL-3594 Adjustments to allow JalviewJS to use ChannelProperties, and new utils/channels dir for jalviewjs and jalviewjs-release

  1. … 50 more files in changeset.