jalview/utils

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Tuesday 13 Apr 2021
5:40 pm

Ben Soares

JAL-3830 Improved jalview.bat to find either pwsh.exe or powershell.exe, and give better messages to the user

Options
    • -3
    • +49
    ./bin/jalview.bat
Wednesday 31 Mar 2021
11:16 pm

Ben Soares

JAL-3830 BAT file wrapper around powershell, so jalview works in command prompt. Added install4j option for installer to add Jalview's bin dir to Path in Windows. Added install4j option to create symlink to bash script to user's local bin (first of ~/bin, ~/.local/bin, ~/local/bin, ~/opt/bin that exists. First two of these usually automatically in PATH).

Options
    • -0
    • +4
    ./bin/jalview.bat
  2. … 3 more files in changeset.
Tuesday 30 Mar 2021
1:43 am

Ben Soares

JAL-3830 Follow all SymbolicLinks in Windows powershell wrapper

Options
    • -4
    • +41
    ./bin/jalview.ps1
Wednesday 24 Mar 2021
1:49 am

Ben Soares

JAL-3830 Moved wrappers to bin/jalview.* and make a symlink bin/jalview. Install4j script now jalviewg

Options
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    • +50
    ./bin/jalview.ps1
    • -0
    • +132
    ./bin/jalview.sh
    • -132
    • +0
    ./jalviewc
    • -50
    • +0
    ./jalviewc.ps1
  5. … 3 more files in changeset.
Wednesday 17 Mar 2021
11:15 pm

Ben Soares

JAL-3830 Allow paths to start with '~'. Make path check more succinct.

Options
    • -3
    • +3
    ./jalviewc
9:06 pm

Ben Soares

JAL-3830 Now using a single universal bash script (jalviewc) for bash in linux, macos, cygwin and WSL. It keeps things together.

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    • +111
    ./jalviewc
    • -69
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    ./jalviewc-macos
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    ./jalviewc-windows
  4. … 3 more files in changeset.
12:22 am

Ben Soares

JAL-3830 bash script that works in both cygwin and WSL (Windows Subsystem for Linux)

Options
    • -0
    • +74
    ./jalviewc-windows
Monday 15 Mar 2021
3:21 pm

Ben Soares

JAL-3830 powershell wrapper tested on linux, macos and windows including spaces in paths. This is the way.

Options
    • -10
    • +26
    ./jalviewc.ps1
Sunday 14 Mar 2021
1:29 am

Ben Soares

JAL-3830 minor fix in powershell wrapper

Options
    • -1
    • +1
    ./jalviewc.ps1
1:27 am

Ben Soares

JAL-3830 powershell follows symlinks as they do exist in NTFS, and of course in linux

Options
    • -3
    • +3
    ./jalviewc.ps1
12:28 am

Ben Soares

JAL-3830 Powershell wrapper now works cross-platform. Who needs bash?!

Options
    • -9
    • +13
    ./jalviewc.ps1
Friday 12 Mar 2021
8:41 pm

Ben Soares

JAL-3830 powershell wrapper tested and fixed

Options
    • -4
    • +6
    ./jalviewc.ps1
6:26 pm

Ben Soares

JAL-3830 improved bash scripts. Added powershell script. Needs testing

Options
    • -10
    • +15
    ./jalviewc
    • -14
    • +49
    ./jalviewc-macos
    • -0
    • +28
    ./jalviewc.ps1
  4. … 2 more files in changeset.
1:09 am

Ben Soares

JAL-3830 unix and macos wrappers. Symbolic link to jalviewc-macos in Contents/MacOS/jalviewc.

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    • +28
    ./jalviewc
    • -0
    • +34
    ./jalviewc-macos
  3. … 4 more files in changeset.
Friday 04 Dec 2020
12:56 am

Ben Soares

JAL-3594 Release images and channel properties

Options
    • binary
    ./Jalview-Logo.png
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    ./jalview_getdown_background.xcf
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    ./jalview_getdown_progress_bar.xcf
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    ./jalview_logo_background_fade-640x480.xcf
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    ./jalview_logo_background_getdown-640x480.png
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    ./jalview_logo_background_getdown-progress-TEST2.png
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    ./jalview_logo_background_getdown-progress.png
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    ./jalview_logo_background_getdown-progress1.png
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    ./jalview_logo_background_getdown-progress2.png
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    ./jalview_logo_background_getdown-progress3-0.png
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    ./jalview_logo_background_getdown-progress3-1.png
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    ./jalview_logo_background_getdown-progress3.xcf
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    ./jalview_logo_background_getdown-progress4.png
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    ./jalview_logo_background_getdown_error-640x480.png
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    ./jalview_logo_background_getdown_instant-640x480.png
  16. … 50 more files in changeset.
Thursday 03 Dec 2020
10:51 pm

Ben Soares

JAL-3594 New way for build.gradle to override properties with channel based properties files. Starting to tidy up some old image files

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    ./develop/Jalview-Logo.png
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    ./develop/jalview_logo_background_blur-640x480.xcf
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    ./develop/jalview_logo_background_getdown-640x480.png
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    ./develop/jalview_logo_background_getdown-progress.png
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    ./develop/jalview_logo_background_getdown-progress3.xcf
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    ./develop/jalview_logo_background_getdown_error-640x480.png
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    ./develop/jalview_logo_background_getdown_instant-640x480.png
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    ./develop/jalview_logos.icns
  9. … 68 more files in changeset.
Wednesday 02 Dec 2020
2:01 pm

Ben Soares

JAL-3594 new logos, icons and cosmetics for getdown and install4j

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    ./develop/Jalview-Logo.png
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    ./develop/jalview_logo_background_blur-640x480.xcf
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    ./develop/jalview_logo_background_getdown-640x480.png
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    ./develop/jalview_logo_background_getdown_error-640x480.png
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    ./develop/jalview_logo_background_getdown_instant-640x480.png
  6. … 30 more files in changeset.
Friday 18 Sep 2020
12:09 pm

Ben Soares

JAL-3594 Different icon/getdown styling when launching jalview built with -PCHANNEL=DEVELOP

Options
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    ./Jalview-Logo.png
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    ./develop/Jalview-Logo.png
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    ./develop/jalview_logo_background_blur-640x480.xcf
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    ./develop/jalview_logo_background_getdown-640x480.png
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    ./develop/jalview_logo_background_getdown-progress.png
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    ./develop/jalview_logo_background_getdown-progress3.xcf
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    ./develop/jalview_logo_background_getdown_error-640x480.png
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    ./develop/jalview_logo_background_getdown_instant-640x480.png
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    ./develop/jalview_logos.icns
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    ./jalview_logos.icns
  11. … 36 more files in changeset.
12:09 pm

Ben Soares

JAL-3594 Different icon/getdown styling when launching jalview built with -PCHANNEL=DEVELOP

Options
    • binary
    ./Jalview-Logo.png
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    ./develop/Jalview-Logo.png
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    ./develop/jalview_logo_background_blur-640x480.xcf
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    ./develop/jalview_logo_background_getdown-640x480.png
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    ./develop/jalview_logo_background_getdown-progress.png
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    ./develop/jalview_logo_background_getdown-progress3.xcf
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    ./develop/jalview_logo_background_getdown_error-640x480.png
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    ./develop/jalview_logo_background_getdown_instant-640x480.png
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    ./develop/jalview_logos.icns
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    ./jalview_logos.icns
  11. … 36 more files in changeset.
Thursday 09 Apr 2020
11:54 am

Ben Soares

JAL-3289 New getdown splashscreens to be used with different getdown channels

Options
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    ./jalview_logo_background_fade-640x480.xcf
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    ./jalview_logo_background_getdown-ARCHIVE-640x480.png
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    ./jalview_logo_background_getdown-BUILD-640x480.png
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    ./jalview_logo_background_getdown-DEVELOP-640x480.png
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    ./jalview_logo_background_getdown-LOCAL-640x480.png
    • binary
    ./jalview_logo_background_getdown-NON-RELEASE-640x480.png

changeset discussion

  1. Jim Procter: Hi Ben Soares - maybe nicer to have these generated by the getdown launcher in the future ? Worth an issue perhaps ?
  2. Ben Soares: Would be nicer. Currently the getdown-launcher is agnostic of which CHANNEL the Jalview version it's in was created w...
Friday 22 Nov 2019
3:32 pm

Ben Soares

JAL-3393 Improved background image for DMG finder window, and associated files for creating it

Options
    • binary
    ./jalview_logo_background_fade-640x480.xcf
  2. … 6 more files in changeset.
Friday 28 Jun 2019
12:05 pm

Ben Soares

JAL-3335 much improved getdown background images

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    ./jalview_logo_background_fade-640x480.xcf
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    ./jalview_logo_background_getdown-640x480.png
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    ./jalview_logo_background_getdown_error-640x480.png
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    ./jalview_logo_background_getdown_instant-640x480.png
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    ./jalview_logo_background_getdown_instant-640x480.xcf
Wednesday 26 Jun 2019
3:50 pm

Ben Soares

JAL-3322 Splashcreen now appears instantly with new setting ui.progress_sync = true. Some other minor improvements

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    ./jalview_logo_background_getdown-640x480.png
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    ./jalview_logo_background_getdown-progress-TEST2.png
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    ./jalview_logo_background_getdown-progress.png
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    ./jalview_logo_background_getdown-progress1.png
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    ./jalview_logo_background_getdown-progress2.png
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    ./jalview_logo_background_getdown-progress3-0.png
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    ./jalview_logo_background_getdown-progress3-1.png
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    ./jalview_logo_background_getdown-progress3.xcf
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    ./jalview_logo_background_getdown-progress4.png
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    ./jalview_logo_background_getdown_error-640x480.png
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    ./jalview_logo_background_getdown_instant-640x480.png
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    ./jalview_logo_background_getdown_instant-640x480.xcf
  13. … 31 more files in changeset.