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JAL-3830 powershell follows symlinks as they do exist in NTFS, and of course in linux

JAL-3830 Powershell wrapper now works cross-platform. Who needs bash?!

JAL-3830 Make wrapper scripts executable

JAL-3830 powershell wrapper tested and fixed

JAL-3830 improved bash scripts. Added powershell script. Needs testing

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JAL-3830 unix and macos wrappers. Symbolic link to jalviewc-macos in Contents/MacOS/jalviewc.

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JAL-3523 Advanced the getdown version number

    • binary
JAL-3830 Improved for .app dir name with spaces, e.g. Jalview Local. Tested on mac to be working.

JAL-3523 Remove getdown setting the working directory to appdir

    • binary
JAL-3830 install4j adds script to Jalview.app/Contents/MacOS/jalview but we need install4j9 to make it executable

JAL-3830 first draft of wrapper script to go in macOS Jalview.app/Contents/MacOS/jalview

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JAL-3816 release date updated to 9th March

JAL-3816 release date set for 8th March and updated what's new

JAL-3816 new known defects JAL-3705 and JAL-3806

Merge branch 'task/JAL-3796_notarization' into develop

Merge branch 'develop' into task/JAL-3796_notarization

JAL-3796 minimal steps for notarization and the entitlements.txt file needed for the codesign tool

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JAL-3618 Enable appBundleIsTraversable in JFileChooser on macOS

JAL-3594 Allow a channel to use a different preferences file than .jalview_properties, with initial read from .jalview_properties

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JAL-3066 Fix NullPointerException thrown when showing HMMER run dialog

JAL-3066 Fix NullPointerException thrown when showing HMMER run dialog

Revert "Merge branch 'bug/JAL-3806_mappingCoversSequence' into releases/Release_2_11_1_Branch"

This reverts commit cb628aab46f9027e71b71203b322f96710e09990, reversing

changes made to a40669b2eeb34a6c760b63c172a31a194b456f24.

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Revert "JAL-3816 release notes for JAL-3806"

This reverts commit ead40d75a04715c80c61e34e277bb995cb2bef90.

JAL-3826 added root=true to editorconfig for IntelliJ

JAL-3826 Simple configuration with CodeStyle implemented in .editorconfig file

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First commit of 3DB FTS Panel & Restclient

JAL-3816 release notes for JAL-3806

Merge branch 'bug/JAL-3806_mappingCoversSequence' into releases/Release_2_11_1_Branch

JAL-3816 JAL-3814 JAL-3813 JAL-3812 JAL-3811 JAL-3818 release notes and date for release

Merge branch 'bug/JAL-3818_jmolDeadlock' into releases/Release_2_11_1_Branch