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Friday 02 Jun 2017
4:41 pm

Jim Procter

4:40 pm

Jim Procter

this looks like the same pattern of scheduler settings as in ServiceStatus - if you wanted to be more Java-ish, you'd have a generic ScheduledEventAttribute class that manipulated a given servlet c...

this looks like the same pattern of scheduler settings as in ServiceStatus - if you wanted to be more Java-ish, you'd have a generic ScheduledEventAttribute class that manipulated a given servlet context's attributes to create/update these stats

4:31 pm

Jim Procter

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  • CR-2
  • started review
JWS-121: Service status and usage statistics show cached results for faster loads
JWS-121: Service status and usage statistics show cached results for faster loads
Thursday 09 Mar 2017
11:20 am

Fábio Madeira

Bumped the javac version.

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    /build.xml
Wednesday 08 Mar 2017
4:57 pm

Fábio Madeira

Reverting to the absolute paths that actually exist and are available to other users in the cluster.

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    /conf/Engine.cluster.properties
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    /conf/Engine.local.properties
4:11 pm

Fábio Madeira

Updated configs for testing local/cluster mode in the internal webservices2 boxe.

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    /conf/Engine.cluster.properties
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    /conf/Engine.local.properties
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    /conf/Executable.properties
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    /conf/Executable.properties.dundee
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    /dundee-conf/Engine.cluster.properties
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    /dundee-conf/Engine.local.properties
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    /dundee-conf/Executable.properties
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    /dundee-conf/GA.properties
Monday 06 Mar 2017
2:17 pm

Fábio Madeira

Added new entries for ignoring .DS_Store and Thumbs.db

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    /.gitignore
2:13 pm

Fábio Madeira

Updated the .idea xml configs. This should be ignored but since it is being tracked I decided to push the current changes.

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    /.idea/ant.xml
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    /.idea/deployment.xml
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    /.idea/webServers.xml
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    /.idea/workspace.xml
2:10 pm

Fábio Madeira

JWS-109 Added a missing figure to the section descrbing the JABAWS codebase structure.

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    /website/man_server_dev.jsp
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    /website/static/img/ws-structure.png
2:09 pm

Fábio Madeira

JWS-109 Updated the Documentation pages. Fixed the links and fixed chuncks of text to improve readability.

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    /website/man_about.jsp
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    /website/man_client.jsp
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    /website/man_configuration.jsp
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    /website/man_dev.jsp
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    /website/man_docs.jsp
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    /website/man_server_dev.jsp
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    /website/man_servervm.jsp
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    /website/man_serverwar.jsp
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    /website/man_stats.jsp
1:59 pm

Fábio Madeira

JWS-109 & JWS-110 Updated the Downloads page so that it follows the same style as the getting started page.

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    /website/download.jsp
1:56 pm

Fábio Madeira

JWS-109 & JWS-113 Improved the readability of the getting started guides. Also removed references to the installation of jpred dependencies.

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    /website/getting_started.jsp
1:55 pm

Fábio Madeira

JWS-109 Updated the home page. Made some changes to the text to improve readability.

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    /website/index.jsp
1:52 pm

Fábio Madeira

JWS-109 Updated the base bootstrap theme header and footer. Also removed unused styling.

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    /website/static/css/main.css
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    /website/template_footer.jsp
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    /website/template_header.jsp
Tuesday 28 Feb 2017
12:21 pm

Fábio Madeira

JWS-113 Commented Jpred entries in the datamodel, runner and webservices java source code.

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    /datamodel/compbio/data/sequence/Alignment.java
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    /datamodel/compbio/data/sequence/JpredAlignment.java
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    /datamodel/compbio/data/sequence/Program.java
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    /datamodel/compbio/data/sequence/SequenceUtil.java
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    /runner/compbio/runner/predictors/Jpred.java
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    /testsrc/compbio/data/sequence/SequenceUtilTester.java
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    /testsrc/compbio/runner/msa/TcoffeeTester.java
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    /testsrc/compbio/runner/predictors/JpredTester.java
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    /webservices/compbio/data/msa/Category.java
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    /webservices/compbio/ws/client/Jws2Client.java
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    /webservices/compbio/ws/client/Services.java
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    /webservices/compbio/ws/client/ServicesUtil.java
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    /webservices/compbio/ws/client/WSTester.java
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    /webservices/compbio/ws/server/JpredWS.java
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    /webservices/compbio/ws/server/WSUtil.java
11:11 am

Fábio Madeira

JWS-115 Bumping version to jabaws 2.2.

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    /build.xml
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    /wsbuild.xml
10:04 am

Fábio Madeira

JWS-111 & JWS-109 Fixed some typos.

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    /website/about.jsp
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    /website/statpages/Joblist.jsp
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    /website/statpages/MonthlySummary.jsp
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    /website/statpages/ServicesStatus.jsp
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    /website/template_footer.jsp
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    /website/template_header.jsp
Monday 13 Feb 2017
5:36 pm

Fábio Madeira

JWS-111 Fixed the location of the statspages, which are now included within the website folder.

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    /build.xml
5:35 pm

Fábio Madeira

JWS-111 & JWS-109 Re-uploading improved ‘Service Status’ and ‘Usage Statistics’ pages that use the template header and footer, as well as the bootstrap look.

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    /website/statpages/Joblist.jsp
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    /website/statpages/MonthlySummary.jsp
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    /website/statpages/ServicesStatus.jsp
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    /website/statpages/Statistics.jsp
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    /website/statpages/StatisticsTable.jsp
5:33 pm

Fábio Madeira

JWS-110 & JWS-109 Added a new downloads (static) page that avoids the signin/registration process.

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    /website/download.jsp
5:32 pm

Fábio Madeira

JWS-109 Added a new documentation root page for improving navigation and listing all the entries in the documentation manual.

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    /website/man_docs.jsp
5:31 pm

Fábio Madeira

JWS-109 Added a new about page for summarising small chunks that were previously spread over several number of pages.

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    /website/about.jsp
5:29 pm

Fábio Madeira

JWS-109 New JSP-based webpages generated from the original HTML files. These pages inherit the template header and footer.

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    /website/getting_started.jsp
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    /website/index.jsp
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    /website/man_about.jsp
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    /website/man_client.jsp
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    /website/man_configuration.jsp
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    /website/man_dev.jsp
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    /website/man_server_dev.jsp
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    /website/man_servervm.jsp
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    /website/man_serverwar.jsp
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    /website/man_stats.jsp
5:27 pm

Fábio Madeira

JWS-109 Added new header and footer JSP templates used by all other webpages.

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    /website/template_footer.jsp
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    /website/template_header.jsp
5:25 pm

Fábio Madeira

JWS-109 Added some basic styling and js very much inspired in the main Barton website.

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    /website/static/css/main.css
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    /website/static/js/main.js
5:23 pm

Fábio Madeira

JWS-111 & JWS-109 Minor changes to table.css (commented sections) in order to inherit Bootstrap styling.

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    /website/static/css/table.css
5:19 pm

Fábio Madeira

JWS-111 & JWS-109 Re-uploaded the css styling used in ‘usage statistics’ pages.

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    /website/static/css/alternative.css
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    /website/static/css/displaytag.css
5:15 pm

Fábio Madeira

JWS-111 & JWS-109 Re-uploading the figures used within usage statistic pages.

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    /website/static/img/tableview/viewsource.png
5:13 pm

Fábio Madeira

JWS-109 Added an animated gif displayed while ‘Service Status’ or ’Usage Statistics’ pages are loading.

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    /website/static/img/loader.gif
5:12 pm

Fábio Madeira

JWS-109 Added a new JABAWS 2.2 logo for the website header.

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    /website/static/img/jabaws2.2.svg