jalview

Clone Tools

Stats

Commits this week: 7
Total Committers: 73
Last Commit:
Commits this week: 7

Lines of code count not available

Commit Activity

Commits By Day In Week
52 week commits volume
Commits By Day In Week
Commits by day
Commits By Day In Week
Commits by hour
Commits By Hour In Day
Commit calendar
 

Most active committers (90 days)

loading
loading
  • last updated a few seconds ago
All Commits Reviews
Constraints
Constraints: committers
 
Constraints: files
Constraints: dates
Tuesday 10 May
5:56 pm

Jim Procter <j.procter@dundee.ac.uk>

JAL-4008 update jabaws client to 2.2.1 - definitely no log4j references !

Options
    • -1
    • +1
    /THIRDPARTYLIBS
    • binary
    /j11lib/jabaws-min-client-NO_LOG4J-2.2.0.jar
    • binary
    /j11lib/jabaws-min-client-NO_LOG4J-2.2.1.jar
    • binary
    /j8lib/jabaws-min-client-NO_LOG4J-2.2.0.jar
    • binary
    /j8lib/jabaws-min-client-NO_LOG4J-2.2.1.jar
Tuesday 19 Apr
3:04 pm

Jim Procter <j.procter@dundee.ac.uk>

Merge branch 'develop' into releases/Release_2_11_2_Branch

Options
3:03 pm

Jim Procter <j.procter@dundee.ac.uk>

JAL-3992 bump version and report updates in 2.11.2.2 release notes

Options
    • -1
    • +1
    /RELEASE
    • -0
    • +24
    /help/help/html/releases.html
3:02 pm

Jim Procter <j.procter@dundee.ac.uk>

Merge branch 'bug/JAL-3997_NPE_in_wrapped_mode' into develop

Options
2:57 pm

Jim Procter <j.procter@dundee.ac.uk>

Merge branch 'bug/JAL-3365_extendedDSSP_via_stockholm' into develop

Options
Monday 18 Apr
2:49 pm

Jim Procter <j.procter@dundee.ac.uk>

JAL-3997 check for tooltip being null before checking equivalence to last tooltip string

Options
    • -1
    • +2
    /src/jalview/gui/SeqPanel.java
1:27 pm

Jim Procter <j.procter@dundee.ac.uk>

Merge branch 'task/JAL-3992_update_docs' into bug/JAL-3365_extendedDSSP_via_stockholm

Options
12:51 pm

Jim Procter <j.procter@dundee.ac.uk>

JAL-3992 fix path

Options
    • -1
    • +1
    /help/help/html/features/cursorMode.html
Saturday 16 Apr
1:36 pm

Jim Procter <j.procter@dundee.ac.uk>

JAL-3365 expand range of allowed DSSP secondary structure symbols in Stockholm files

Options
    • -19
    • +21
    /src/jalview/datamodel/AlignmentAnnotation.java
    • -1
    • +1
    /src/jalview/io/StockholmFile.java
    • -0
    • +12
    /test/jalview/io/StockholmFileTest.java
Wednesday 13 Apr
4:13 pm

Jim Procter <j.procter@dundee.ac.uk>

JAL-3992 shift+arrow to jump to next gap/residue in cursor/keyboard editing mode

Options
    • -8
    • +12
    /help/help/html/features/cursorMode.html
Tuesday 05 Apr
8:48 pm

Jim Procter <j.procter@dundee.ac.uk>

Merge branch 'develop' into releases/Release_2_11_2_Branch

Options
8:44 pm

Jim Procter <j.procter@dundee.ac.uk>

JAL-3990 release notes and what’s new

Options
    • -5
    • +0
    /help/help/html/releases.html
    • -8
    • +7
    /help/help/html/whatsNew.html
6:50 pm

Jim Procter <j.procter@dundee.ac.uk>

Merge branch 'develop' into releases/Release_2_11_2_Branch

Options
6:37 pm

Jim Procter <j.procter@dundee.ac.uk>

JAL-3981 patch tests and remove errant imports

Options
    • -4
    • +1
    /src/jalview/io/SequenceAnnotationReport.java
    • -13
    • +22
    /test/jalview/io/SequenceAnnotationReportTest.java
6:15 pm

Jim Procter <j.procter@dundee.ac.uk>

Merge branch 'develop' into releases/Release_2_11_2_Branch

Options
6:14 pm

Jim Procter <j.procter@dundee.ac.uk>

JAL-3990 gradle spotlessApply

Options
    • -1
    • +2
    /src/jalview/gui/structurechooser/TDBResultAnalyser.java
    • -3
    • +3
    /src/jalview/io/SequenceAnnotationReport.java
    • -6
    • +4
    /test/jalview/fts/service/pdb/PDBFTSRestClientTest.java
    • -4
    • +2
    /test/jalview/gui/structurechooser/StructureChooserQuerySourceTest.java
6:12 pm

Jim Procter <j.procter@dundee.ac.uk>

JAL-3990 release notes for 2.11.2.1 patch release

Options
    • -5
    • +10
    /help/help/html/releases.html
5:57 pm

Jim Procter <j.procter@dundee.ac.uk>

Merge branch 'bug/JAL-3980_JAL-3981_tooltips_sequence_details' into develop

Options
Thursday 31 Mar
11:11 pm

Jim Procter <j.procter@dundee.ac.uk>

Merge branch 'develop' into releases/Release_2_11_2_Branch

Options
8:44 pm

Jim Procter <j.procter@dundee.ac.uk>

JAL-3983 release note for JAL-3985

Options
    • -0
    • +4
    /help/help/html/releases.html
8:42 pm

Jim Procter <j.procter@dundee.ac.uk>

Merge branch 'bug/JAL-3085_avoid_414_error_for_PDBFTS' into develop

Options
3:17 pm

Jim Procter <j.procter@dundee.ac.uk>

JAL-3085 update tests and mock responses, new P0dtd1 testcase

Options
    • -343
    • +362
    /test/jalview/fts/service/pdb/PDBFTSRestClientTest.java
    • -5
    • +13
    /test/jalview/fts/threedbeacons/TDBeaconsFTSRestClientTest.java
    • -1
    • +1
    /test/jalview/fts/threedbeacons/p01308_pdbfts_query.txt
    • -0
    • +1
    /test/jalview/fts/threedbeacons/p01308_tdb_fts_query_resp.txt
    • -1
    • +0
    /test/jalview/fts/threedbeacons/p01308_tdb_resp.txt
    • -0
    • +2
    /test/jalview/fts/threedbeacons/p0dtd1_pdbfts_fts_query_pt1.txt
    • -0
    • +2506
    /test/jalview/fts/threedbeacons/p0dtd1_pdbfts_fts_query_pt1_resp.txt
    • -0
    • +2
    /test/jalview/fts/threedbeacons/p0dtd1_pdbfts_fts_query_pt2.txt
    • -0
    • +2520
    /test/jalview/fts/threedbeacons/p0dtd1_pdbfts_fts_query_pt2_resp.txt
    • -0
    • +1
    /test/jalview/fts/threedbeacons/p0dtd1_pdbfts_fts_query_pt3.txt
    • -0
    • +2517
    /test/jalview/fts/threedbeacons/p0dtd1_pdbfts_fts_query_pt3_resp.txt
    • -0
    • +1
    /test/jalview/fts/threedbeacons/p0dtd1_pdbfts_fts_query_pt4.txt
    • -0
    • +793
    /test/jalview/fts/threedbeacons/p0dtd1_pdbfts_fts_query_pt4_resp.txt
    • -0
    • +1
    /test/jalview/fts/threedbeacons/p0dtd1_tdb_fts_query_resp.txt
    • -0
    • +1
    /test/jalview/fts/threedbeacons/p38398_tdb_fts_query_resp.txt
    • -13
    • +132
    /test/jalview/gui/structurechooser/StructureChooserQuerySourceTest.java
2:06 pm

Jim Procter <j.procter@dundee.ac.uk>

JAL-3985 formatting

Options
    • -0
    • +3
    /src/jalview/gui/structurechooser/ThreeDBStructureChooserQuerySource.java
2:06 pm

Jim Procter <j.procter@dundee.ac.uk>

JAL-3985 split PDB id queries into multiple queries so server doesn’t 414

Options
    • -26
    • +62
    /src/jalview/gui/structurechooser/ThreeDBStructureChooserQuerySource.java
Wednesday 30 Mar
6:35 pm

Jim Procter <j.procter@dundee.ac.uk>

Merge branch 'patch/JAL-3976_3dbeaconsnull' into develop

Options
5:32 pm

Jim Procter <j.procter@dundee.ac.uk>

JAL-3976 fix mock PDBFTS query & responses

Options
    • -1
    • +1
    /test/jalview/fts/threedbeacons/p01308_pdbfts_query.txt
    • -1
    • +2377
    /test/jalview/fts/threedbeacons/p01308_pdbfts_resp.txt
4:56 pm

Jim Procter <j.procter@dundee.ac.uk>

JAL-3983 known issue note for JAL-3984

Options
    • -0
    • +4
    /help/help/html/releases.html
4:54 pm

Jim Procter <j.procter@dundee.ac.uk>

JAL-3983 release notes for JAL-3975 and known issue note for JAL-3984

Options
    • -2
    • +2
    /help/help/html/releases.html
4:52 pm

Jim Procter <j.procter@dundee.ac.uk>

Merge branch 'bug/JAL-360+JAL-3975_keyboard_input_lost_after_dialog' into develop

Options
4:51 pm

Jim Procter <j.procter@dundee.ac.uk>

JAL-360 JAL-3975 update parent for text colour dialog - doesn't seem to help but we live in hope..

Options
    • -7
    • +7
    /src/jalview/gui/TextColourChooser.java