jalview

Clone Tools

Stats

Commits this week: 8
Total Committers: 73
Last Commit:
Commits this week: 8

Lines of code count not available

Commit Activity

Commits By Day In Week
52 week commits volume
Commits By Day In Week
Commits by day
Commits By Day In Week
Commits by hour
Commits By Hour In Day
Commit calendar
 

Most active committers (90 days)

loading
loading
  • last updated a few seconds ago
All Commits Reviews
Constraints
Constraints: committers
 
Constraints: files
Constraints: dates
Wednesday 08 Apr 2020
2:25 pm

Ben Soares

JAL-3588 Auto insert of Examples folder into DMG and an attempt to style both the Volume icon and the Examples folder icon (icons not working)

Options
    • -2
    • +40
    /build.gradle
    • -1
    • +4
    /gradle.properties
    • binary
    /utils/install4j/DMG.VolumeIcon.icns
    • binary
    /utils/install4j/DS_Store
    • binary
    /utils/install4j/examples_folder.png
    • -2
    • +4
    /utils/install4j/install4j8_template.install4j
    • -0
    • +0
    /utils/install4j/jalview_macos_examples_folder_icon
Tuesday 07 Apr 2020
2:24 pm

Ben Soares

JAL-3577 improvement to non-release DMG background and source SVG. Updated docs on image specification/creation.

Options
    • -2
    • +6
    /utils/install4j/DMG_background_image_creation_README.md
    • binary
    /utils/install4j/jalview_dmg_background-NON-RELEASE.png
    • -215
    • +0
    /utils/install4j/jalview_dmg_background-NON-RELEASE.svg
    • -0
    • +44379
    /utils/install4j/jalview_dmg_background_blur_layers-NON-RELEASE.svg
1:30 am

Ben Soares

Merge branch 'task/JAL-3577_Jalview_Test_installers' into develop

Options
1:29 am

Ben Soares

JAL-3577 Added DEVELOP DMG styling. Improved TEST-RELEASE and NON-RELEASE styling

Options
    • -2
    • +5
    /build.gradle
    • binary
    /utils/install4j/DS_Store-DEVELOP
    • binary
    /utils/install4j/DS_Store-NON-RELEASE
    • -1
    • +1
    /utils/install4j/install4j8_template.install4j
    • binary
    /utils/install4j/jalview_dmg_background-DEVELOP.png
    • binary
    /utils/install4j/jalview_dmg_background-NON-RELEASE.png
    • binary
    /utils/install4j/jalview_dmg_background-TEST.png
Monday 06 Apr 2020
10:34 pm

Ben Soares

JAL-3577 Fixed Jalview Programme Group in Windows menu. Added examples folder for RELEASE channel only and Examples folder in Jalview Programme Group in Windows.

Options
    • -1
    • +31
    /build.gradle
    • -5
    • +27
    /utils/install4j/install4j8_template.install4j
5:47 pm

Jim Procter

JAL-3407 redact java 8 incompatible type inference

Options
    • -1
    • +1
    /src/jalview/gui/Desktop.java
5:25 pm

Jim Procter

JAL-3407 updated release date to Thursday 9th April, and release notes for JAL-3577 JAL-3581 JAL-3571

Options
    • -1
    • +12
    /help/help/html/releases.html
3:58 pm

gmungoc <g.m.carstairs@dundee.ac.uk>

JAL-3581 no hidden sequence marker if hidden markers not shown

Options
    • -6
    • +6
    /src/jalview/gui/IdCanvas.java
3:49 pm

Ben Soares

JAL-3577 Moved application Categories for freedesktop menus into correct place in install4j

Options
    • -2
    • +6
    /build.gradle
    • -1
    • +1
    /gradle.properties
    • -2
    • +3
    /utils/install4j/install4j8_template.install4j
1:32 pm

Ben Soares

JAL-3577 removed debugging

Options
    • -2
    • +2
    /build.gradle
1:29 pm

Ben Soares

Merge branch 'task/JAL-3577_Jalview_Test_installers' into develop

Options
1:27 pm

Ben Soares

JAL-3577 Added existing and new Application IDs for Windows. Fixed Desktop shortcut and Menu entry.

Options
    • -6
    • +13
    /build.gradle
    • -0
    • +1
    /gradle.properties
    • -12
    • +16
    /utils/install4j/install4j8_template.install4j
10:18 am

gmungoc <g.m.carstairs@dundee.ac.uk>

JAL-3579 no Feature Editor if features not shown

Options
    • -19
    • +19
    /src/jalview/gui/SeqPanel.java
9:20 am

Ben Soares

JAL-3577 Changed shortName to INTERNAL_ID

Options
    • -1
    • +1
    /utils/install4j/install4j8_template.install4j
Sunday 05 Apr 2020
10:50 am

Ben Soares

JAL-3577 Changed Windows internal ID to a new value which is backward compatible with the 2.11.0 installation. i.e. release versions will have internal ID 'Jalview'

Options
    • -2
    • +2
    /build.gradle
10:50 am

Ben Soares

JAL-3577 Changed Windows internal ID to a new value which is backward compatible with the 2.11.0 installation. i.e. release versions will have internal ID 'Jalview'

Options
    • -9
    • +19
    /build.gradle
    • -1
    • +1
    /gradle.properties
    • -23
    • +9
    /utils/install4j/install4j8_template.install4j
Saturday 04 Apr 2020
1:01 am

Ben Soares

JAL-3577 Added DS_Store for Test release to look like proper installer

Options
    • -4
    • +15
    /build.gradle
    • binary
    /utils/install4j/DS_Store-TEST-RELEASE
Friday 03 Apr 2020
5:04 pm

Ben Soares

JAL-3577 Added a jalviewt scheme ONLY to TEST-RELEASE and TEST-LOCAL channels so that a test jvl can be made to ONLY open in the Test installation

Options
    • -0
    • +4
    /build.gradle
    • -0
    • +7
    /utils/install4j/install4j8_template.install4j
4:44 pm

Ben Soares

JAL-3577 cleaned up old DMG files. Added NON-RELEASE DMG files. Changed how Jalview name propogates through install4j -- now dynamically created depending on the CHANNEL

Options
    • -14
    • +31
    /build.gradle
    • -4
    • +1
    /gradle.properties
    • -0
    • +3
    /utils/install4j/DMG_background_image_creation_README.md
    • -15
    • +12
    /utils/install4j/DMG_creation_README.md
    • binary
    /utils/install4j/DS_Store-NON-RELEASE
    • binary
    /utils/install4j/DS_Store_1
    • binary
    /utils/install4j/DS_Store_2
    • binary
    /utils/install4j/DS_Store_3
    • binary
    /utils/install4j/DS_Store_4
    • -11
    • +14
    /utils/install4j/install4j8_template.install4j
    • binary
    /utils/install4j/jalview_dmg_background-NON-RELEASE.png
    • -0
    • +215
    /utils/install4j/jalview_dmg_background-NON-RELEASE.svg
    • binary
    /utils/install4j/jalview_dmg_background_blur.png
    • binary
    /utils/install4j/jalview_dmg_background_blur_72dpi.png
    • binary
    /utils/install4j/jalview_dmg_background_large.png
  16. … 4 more files in changeset.
12:41 am

Ben Soares

JAL-3577 First attempt at new folder names

Options
    • -3
    • +25
    /build.gradle
    • -9
    • +11
    /utils/install4j/install4j8_template.install4j
Thursday 02 Apr 2020
2:55 pm

Ben Soares

JAL-3572 Added getdown Implementation-Version to getdown jars META-INF/MANIFEST.MF

Options
    • -0
    • +1
    /getdown/lib/FJVL_VERSION
    • -0
    • +1
    /getdown/lib/JVL_VERSION
    • binary
    /getdown/lib/getdown-core.jar
    • binary
    /getdown/lib/getdown-launcher-local.jar
    • binary
    /getdown/lib/getdown-launcher.jar
    • -1
    • +1
    /getdown/src/getdown/ant/pom.xml
    • -1
    • +15
    /getdown/src/getdown/core/pom.xml
    • -1
    • +2
    /getdown/src/getdown/launcher/pom.xml
    • -1
    • +3
    /getdown/src/getdown/mvn_cmd
    • -1
    • +1
    /getdown/src/getdown/pom.xml
    • binary
    /j11lib/getdown-core.jar
    • binary
    /j8lib/getdown-core.jar
12:42 pm

Ben Soares

Merge branch 'improvement/JAL-3394_added_categories_to_unix_shell_installer_desktop_file' into develop

Options
    • -0
    • +1
    /build.gradle
    • -1
    • +2
    /gradle.properties
Tuesday 31 Mar 2020
11:10 pm

Jim Procter

Merge branch 'documentation/Release_2_11_1_Branch' into develop

Options
11:09 pm

Jim Procter

JAL-3407 basic doc for releasing jalview - will be embellished as we go

Options
    • -0
    • +18
    /doc/releaseprocess.md
10:53 pm

Jim Procter

JAL-3407 updated release date to 2nd April, and first draft of release notes

Options
    • -1
    • +5
    /help/help/html/releases.html
    • -82
    • +35
    /help/help/html/whatsNew.html
2:41 pm

gmungoc <g.m.carstairs@dundee.ac.uk>

JAL-1889 better (?) wait for Conservation thread

Options
    • -9
    • +9
    /test/jalview/gui/AlignViewportTest.java
10:25 am

Jim Procter

Merge branch 'documentation/Release_2_11_1_Branch' into develop

Options
Monday 30 Mar 2020
6:03 pm

Jim Procter

JAL-3407 2.11.1.0 release date bump - maybe tomorrow - maybe the next day !

Options
    • -10
    • +8
    /help/help/html/releases.html
6:03 pm

Jim Procter

JAL-3407 JAL-3130 back out java 9+ syntax that breaks java 8 builds

Options
    • -1
    • +1
    /src/jalview/io/SequenceAnnotationReport.java
Friday 27 Mar 2020
4:08 pm

Ben Soares

JAL-3225 updated essential files for eclipse project if buildship fails

Options
    • binary
    /utils/eclipse/eclipse_startup_files.zip