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sasha sherstnev <a.sherstnev@dundee.ac.uk> in jabaws

Replace temporary path to the download app with the standard one

Replace links to Download and last edit date

  1. … 4 more files in changeset.
Switch to Java 6 for building

Merge branch 'develop' of https://source.jalview.org/git/jabaws into develop

Change for eclipse

Update build.xml file: 1. New targets: core-jar and core-source-jar 2. switch to java 1.7 3. remove aacon-ws-client

modify .gitignore to current JABAWS git structure

Changes to text on the website

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Add an old jpred.pl script

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    /binaries/src/jpred/jpred_old.pl
Fix problems with tests

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    /testsrc/compbio/metadata/RunnerConfigTester.java
Re-design jpred.pl input options: no -seq for a file with 1 FASTA record only.

Define path to UNIREF database in conf/Executable.properties

Diable printing environmental variables in procInput.txt

Remove difinition of UNIREF for JABAWS from jpred.pl

Merge branch 'develop' of https://source.jalview.org/git/jabaws into develop

Update information on Jabaws VA

Fix bug with DB checking in jpred.pl

Comment code for future options

Slightly changed JSP page

Fix wrong error message

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    • +8
    /runner/compbio/runner/conservation/AACon.java
Fix problem with HTML code

Fix problem with old Probcons code: couldn't be complied with modern gcc since string.h is needed

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    /binaries/src/probcons/CompareToRef.cc
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    /binaries/src/probcons/ProjectPairwise.cc
Simplify code

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    /datamodel/compbio/metadata/Option.java
Lots of changes for Jabaws 2.1 website

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    /website/man_server_dev.html
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Re-build WS artefacts

Remove still unsupported methods of RegistryWS

Swtich off GA by default

Google analytics receives message with actual Jabaws version

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    /webservices/compbio/ws/server/GAUtils.java
Bug Fixg: testing RNAalifold jobs have been considered as real ones

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    /webservices/compbio/ws/client/WSTester.java
test WS on internal server in the case of proxying