|
Closed
|
CR-JAL-116
|
Mungo Carstairs
|
JAL-2598 Sequence.getSequence return a copy of the char array
|
29 |
3 years and 4 months
|
|
|
|
Closed
|
CR-JAL-117
|
Mungo Carstairs
|
JAL-2526: SequenceCursor for more efficient Sequence.findPosition,...
|
12 |
3 years and 4 months
|
|
|
|
Review
|
CR-JAL-119
|
Jim Procter
|
JAL-2804: Optionally disable 'autosearch' on FTS
|
3 |
3 years and 4 months
|
|
|
|
Review
|
CR-JAL-120
|
Jim Procter
|
JAL-2810: Bulk ID retrieval tab for FTS Panel
|
4 |
3 years and 4 months
|
|
|
|
Review
|
CR-JAL-121
|
Kira Mourão
|
JAL-2756 update for new EBI https link
|
3 |
3 years and 3 months
|
|
|
|
Review
|
CR-JAL-122
|
Kira Mourão
|
JAL-2774: ViewportRanges fires 2 events when both start residue and...
|
18 |
3 years and 3 months
|
|
|
|
Review
|
CR-JAL-123
|
Jim Procter
|
JAL-2810: Bulk ID retrieval tab for FTS Panel
|
5 |
3 years and 3 months
|
|
|
|
Closed
|
CR-JAL-124
|
Mungo Carstairs
|
JAL-2791: Operations on features should respect individual feature...
|
4 |
3 years and 3 months
|
|
|
|
Review
|
CR-JAL-125
|
Jim Procter
|
JAL-2494: tests for...
|
4 |
3 years and 3 months
|
|
|
|
Review
|
CR-JAL-126
|
Mungo Carstairs
|
JAL-2829: Sequence.deleteChars (including gaps) makes incorrect new...
|
2 |
3 years and 3 months
|
|
|
|
Review
|
CR-JAL-127
|
Mungo Carstairs
|
JAL-2525: Performant lookup of features by Ontology term
|
7 |
3 years and 3 months
|
|
|
|
Draft
|
CR-JAL-129
|
Jim Procter
|
JAL-2828: Document duplicate findAnnotations code in SequenceGroup and...
|
3 |
3 years and 3 months
|
|
|
|
Closed
|
CR-JAL-130
|
Jim Procter
|
JAL-2828: Document duplicate findAnnotations code in SequenceGroup and...
|
3 |
3 years and 3 months
|
|
|
|
Review
|
CR-JAL-131
|
Kira Mourão
|
JAL-2811: Double residue highlights in cursor mode if new selection...
|
3 |
3 years and 3 months
|
|
|
|
Review
|
CR-JAL-132
|
Kira Mourão
|
JAL-2831: Very slow resonse in command mode
|
13 |
3 years and 3 months
|
|
|
|
Review
|
CR-JAL-133
|
Jim Procter
|
JAL-2822: Start and End updated when sequence data added/removed via...
|
3 |
3 years and 3 months
|
|
|
|
Closed
|
CR-JAL-134
|
Mungo Carstairs
|
JAL-2791 select columns by _visible_ features
|
3 |
3 years and 3 months
|
|
|
|
Review
|
CR-JAL-135
|
Kira Mourão
|
JAL-2851: Alignment doesn't appear to scroll with Trackpad and...
|
2 |
3 years and 3 months
|
|
|
|
Review
|
CR-JAL-136
|
Kira Mourão
|
JAL-2842: Jumping into hidden region at start of alignment then...
|
2 |
3 years and 3 months
|
|
|
|
Closed
|
CR-JAL-137
|
Jim Procter
|
JAL-2859: Only one structure loaded when several different sequences &...
|
2 |
3 years and 3 months
|
|
|
|
Review
|
CR-JAL-139
|
Koen van der Heide
|
JAL-2871: Handle missing Archaeopteryx configuration file
|
2 |
3 years and 2 months
|
|
|
|
Review
|
CR-JAL-140
|
Kira Mourão
|
JAL-2759: Add cursor to HiddenColumns
|
38 |
3 years and 1 month
|
|
|
|
Closed
|
CR-JAL-141
|
Mungo Carstairs
|
JAL-2876 test threshold for Colour by Label
|
3 |
3 years and 1 month
|
|
|
|
Closed
|
CR-JAL-142
|
Mungo Carstairs
|
JAL-2865 unhelpful System.gc() calls removed
|
4 |
3 years and 1 month
|
|
|
|
Closed
|
CR-JAL-143
|
Mungo Carstairs
|
JAL-2864: Address memory leaks (for 2.11.0)
|
4 |
3 years and 1 month
|
|
|
|
Closed
|
CR-JAL-144
|
Mungo Carstairs
|
JAL-2848 apply / Cancel colour changes in Amend Features
|
1 |
3 years and 1 month
|
|
|
|
Review
|
CR-JAL-145
|
Koen van der Heide
|
JAL-2750: Tree calculation hangs when a column selection is dragged...
|
3 |
3 years and 1 month
|
|
|
|
Review
|
CR-JAL-146
|
Kira Mourão
|
JAL-2778: Overview panel redraws slowly when overlapping the alignment...
|
12 |
3 years and 1 month
|
|
|
|
Review
|
CR-JAL-147
|
Koen van der Heide
|
JAL-281: Load tree from URL
|
27 |
3 years and 1 month
|
|
|
|
Review
|
CR-JAL-148
|
Jim Procter
|
Review patches from develop for Release 2.10.3b1
|
17 |
3 years and 1 month
|
|
|
|
Review
|
CR-JAL-149
|
Kira Mourão
|
JAL-2674 Transferred updated unit tests from first 2674 branch
|
75 |
3 years
|
|
|
|
Review
|
CR-JAL-150
|
Mungo Carstairs
|
JAL-984 better behaved panel height adjuster
|
4 |
3 years
|
|
|
|
Review
|
CR-JAL-151
|
Mungo Carstairs
|
JAL-2666 basic initial fix for split screen scroll bug
|
4 |
3 years
|
|
|
|
Review
|
CR-JAL-152
|
Mungo Carstairs
|
JAL-2885: Update uniprot.org endpoints to https (by 20th June 2018)
|
20 |
3 years
|
|
|
|
Review
|
CR-JAL-153
|
Mungo Carstairs
|
JAL-2930: Trackpad scroll right or down is broken in Java >= 1.8.0u152
|
4 |
2 years and 11 months
|
|
|
|
Review
|
CR-JAL-155
|
Jim Procter
|
JAL-2944: Allow structures to be opened in a specific structure view
|
8 |
2 years and 10 months
|
|
|
|
Review
|
CR-JAL-156
|
Jim Procter
|
JAL-1847: Allow multiple PDB structures to be shown without performing...
|
7 |
2 years and 10 months
|
|
|
|
Review
|
CR-JAL-157
|
Mungo Carstairs
|
JAL-2899: Threshold change in Colour by Annotation doesn't update...
|
3 |
2 years and 10 months
|
|
|
|
Review
|
CR-JAL-159
|
Mungo Carstairs
|
JAL-2997: Improve the Clustal format parser so that it can cope with...
|
5 |
2 years and 9 months
|
|
|
|
Closed
|
CR-JAL-160
|
Mungo Carstairs
|
JAL-2993: Pass Keystrokes received by Overview window back to parent...
|
1 |
2 years and 9 months
|
|
|
|
Closed
|
CR-JAL-161
|
Jim Procter
|
JAL-1460: drag URL from chrome, firefox, IE to Jalview desktop yields...
|
3 |
2 years and 9 months
|
|
|
|
Review
|
CR-JAL-162
|
Mungo Carstairs
|
JAL-2956: Persist HMMER profile(s) in Jalview project
|
7 |
2 years and 9 months
|
|
|
|
Review
|
CR-JAL-163
|
Mungo Carstairs
|
JAL-2994: Try harder to locate Chimera executable on windows platforms
|
3 |
2 years and 8 months
|
|
|
|
Review
|
CR-JAL-164
|
Jim Procter
|
JAL-3048 jalview.utils.dialogrunner.DialogRunner allows sequences of...
|
11 |
2 years and 8 months
|
|
|
|
Review
|
CR-JAL-166
|
Jim Procter
|
JAL-3035: Remove dependency on jdas client library
|
44 |
2 years and 7 months
|
|
|
|
Review
|
CR-JAL-167
|
Ben Soares
|
JAL-3065
|
7 |
2 years and 7 months
|
|
|
|
Review
|
CR-JAL-169
|
Mungo Carstairs
|
JAL-3076 fetch Ensembl sequence as JSON instead of Fasta
|
22 |
2 years and 6 months
|
|
|
|
Review
|
CR-JAL-171
|
Mungo Carstairs
|
JAL-3132 set status message when over sequence id or annotation label
|
9 |
2 years and 4 months
|
|
|
|
Review
|
CR-JAL-172
|
Ben Soares
|
JAL-3141 Backup files being created with default suffix up to 10...
|
34 |
2 years and 4 months
|
|
|
|
Review
|
CR-JAL-175
|
Jim Procter
|
JAL-3127: Shade mapped structures or alignment by Sequence's ID colour
|
52 |
2 years and 3 months
|
|
|
|
Review
|
CR-JAL-176
|
Ben Soares
|
JAL-3174 Merging in some test filename-case fixes
|
2 |
2 years and 2 months
|
|
|
