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All Reviews

State Review Owner Name Files Comments Age Due Reviewers
Review CR-JAL-1 Mungo Carstairs JAL-2362 corrected lookup of residue colour 127 94 4 years
Review CR-JAL-5 Tochukwu Charles N Ofoegbu Phyre2 model import and UI prototype 502 9 3 years and 11 months
Closed CR-JAL-8 Mungo Carstairs JAL-2344: Refactor file format options as interfaces instead of text... 46 13 3 years and 11 months
Closed CR-JAL-10 Mungo Carstairs JAL-2380 fix Matrix.postMultiply() 2 4 3 years and 11 months
Closed CR-JAL-11 Mungo Carstairs JAL-2379: Improve PCA memory management 12 5 3 years and 11 months
Closed CR-JAL-13 Mungo Carstairs JAL-2379 'direct' pairwise score calculation for PCA (no encoding) 3 12 3 years and 11 months
Review CR-JAL-16 Mungo Carstairs merging Chimera spike to Jalview 47 22 3 years and 10 months
Closed CR-JAL-17 Kira Mourão JAL-2388: Option to exclude hidden regions in overview window 123 24 3 years and 10 months
Closed CR-JAL-18 Mungo Carstairs JAL-2438: Make findFeatureColour thread-safe and smarter 30 11 3 years and 10 months
Closed CR-JAL-19 Mungo Carstairs JAL-2431 show cDNA consensus after New View in split frame 4 0 3 years and 9 months
Closed CR-JAL-20 Mungo Carstairs JAL-2399 JAL-2400 tidy Text Colour wording, behaviour including Cancel 4 0 3 years and 9 months
Closed CR-JAL-21 Mungo Carstairs JAL-2401: "Lower case colour" button in user colourschemes dialog is... 6 4 3 years and 9 months
Closed CR-JAL-22 Mungo Carstairs JAL-2405: Protein specific colours enabled in selected group colour... 7 3 3 years and 9 months
Closed CR-JAL-23 Mungo Carstairs JAL-2430 colour columns hidden in alignment gray on structure 10 6 3 years and 9 months
Draft CR-JAL-24 Mungo Carstairs JAL-1608 menu entry text; enable/disable Create/Remove Group option 5 0 3 years and 9 months
Closed CR-JAL-25 Mungo Carstairs JAL-1608 menu entry text; enable/disable Create/Remove Group option 5 2 3 years and 9 months
Closed CR-JAL-26 Mungo Carstairs JAL-2435 copy font changes across split screen 9 0 3 years and 9 months
Draft CR-JAL-27 Mungo Carstairs JAL-2443: Remove getResidueBoxColour from api.SequenceRenderer 11 0 3 years and 9 months
Closed CR-JAL-28 Mungo Carstairs JAL-2386: Change Colour (All Groups) applies PID threshold but not... 7 0 3 years and 9 months
Draft CR-JAL-29 Tochukwu Charles N Ofoegbu JAL-2375 JAL-2376 First commit of implementation for Phyre2 result... 502 0 3 years and 9 months
Closed CR-JAL-30 Mungo Carstairs JAL-2385: Colour threshold slider doesn't update value when switching... 20 0 3 years and 9 months
Closed CR-JAL-31 Mungo Carstairs JAL-2383: Above PID threshold not restored from project 14 1 3 years and 9 months
Review CR-JAL-32 Tochukwu Charles N Ofoegbu JAL-1648: Remember search queries employed previously in Find and... 11 14 3 years and 9 months
Closed CR-JAL-33 Mungo Carstairs JAL-2416: Load score matrices from file or resource file 46 21 3 years and 9 months
Closed CR-JAL-34 Mungo Carstairs JAL-2398: Blosum62 C->R is 3, should be -3 4 0 3 years and 9 months
Closed CR-JAL-35 Mungo Carstairs JAL-2397: Correct PCA (Jalview/SeqSpace) and substitution matrix based... 9 7 3 years and 9 months
Closed CR-JAL-36 Mungo Carstairs JAL-2428: NJTree refactoring 18 4 3 years and 9 months
Closed CR-JAL-37 Mungo Carstairs JAL-2468 change score model in PCAModel when switching... 1 0 3 years and 9 months
Review CR-JAL-38 Tochukwu Charles N Ofoegbu JAL-2473: UI component disappear on downward resizing Jalview frames /... 11 2 3 years and 9 months
Closed CR-JAL-39 Mungo Carstairs JAL-1632: Dialog to create/edit tree calculation settings 46 0 3 years and 9 months
Review CR-JAL-40 Tochukwu Charles N Ofoegbu JAL-2482 Bugfix 1 2 3 years and 9 months
Review CR-JAL-41 Tochukwu Charles N Ofoegbu JAL-1648: Remember search queries employed previously in Find and... 14 15 3 years and 8 months
Draft CR-JAL-42 Jim Procter JAL-2432: filter/threshold annotation rows or features by percentile... 5 0 3 years and 8 months
Closed CR-JAL-43 Mungo Carstairs JAL-2476 ability to drag and drop score matrix file to desktop,... 6 2 3 years and 8 months
Review CR-JAL-44 Tochukwu Charles N Ofoegbu JAL-2376 copied out patch from Phyre branch 2 0 3 years and 8 months
Draft CR-JAL-46 Tochukwu Charles N Ofoegbu JAL-2465: No mapping generated for 3D Structures loaded in Jmol via... 15 2 3 years and 8 months
Closed CR-JAL-48 Kira Mourão JAL-2491: Overview window and Find only scroll one panel when the... 18 0 3 years and 8 months
Closed CR-JAL-50 Mungo Carstairs JAL-2447: option to enable/disable 'experimental' options in Jalview's... 4 0 3 years and 8 months
Review CR-JAL-51 Jim Procter JAL-2499: fix Sequence Features PCA calculation 14 4 3 years and 8 months
Draft CR-JAL-52 Mungo Carstairs JAL-2506: New Sequence Feature dialog errors with graduated colour 1 0 3 years and 8 months
Closed CR-JAL-53 Mungo Carstairs JAL-2532: Cancel in Feature Settings loses changes made in Amend... 2 0 3 years and 8 months
Closed CR-JAL-54 Mungo Carstairs JAL-2423: incorrect title in output window when exporting tree... 5 0 3 years and 8 months
Review CR-JAL-56 Mungo Carstairs JAL-1476: warn user when no columns available to compute structure... 2 0 3 years and 8 months
Draft CR-JAL-57 Mungo Carstairs JAL-2295 status messages for Chimera attributes set and for failed... 10 0 3 years and 8 months
Review CR-JAL-58 Mungo Carstairs JAL-2504: 'New feature' from Find results has incorrect default... 9 0 3 years and 7 months
Review CR-JAL-59 Mungo Carstairs JAL-2544: Sort by features buggy with gapped selection region 3 0 3 years and 7 months
Closed CR-JAL-60 Kira Mourão JAL-2536 Overview window sizing not subject to min size restrictions 2 1 3 years and 7 months
Closed CR-JAL-61 Mungo Carstairs JAL-2358: 'Add to viewer' sometimes offered for a closed viewer 4 2 3 years and 7 months
Closed CR-JAL-62 Mungo Carstairs JAL-2547: Sequence feature tooltips on gaps 2 0 3 years and 7 months
Review CR-JAL-63 Tochukwu Charles N Ofoegbu JAL-2465: No mapping generated for 3D Structures loaded in Jmol via... 33 0 3 years and 7 months
Closed CR-JAL-64 Kira Mourão JAL-2571 Corrected alignment width/height checks to visible only 5 1 3 years and 7 months