Index: jalview_java2/conf/logging.properties
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--- jalview_java2/conf/logging.properties	(revision 14e2a34a47e8a0c7d22ceb5d0a36cf2b258b3f9c)
+++ jalview_java2/conf/logging.properties	(revision 0)
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-############################################################
-#  	Default Logging Configuration File
-#
-# You can use a different file by specifying a filename
-# with the java.util.logging.config.file system property.  
-# For example java -Djava.util.logging.config.file=myfile
-############################################################
-
-############################################################
-#  	Global properties
-############################################################
-
-# "handlers" specifies a comma separated list of log Handler 
-# classes.  These handlers will be installed during VM startup.
-# Note that these classes must be on the system classpath.
-# By default we only configure a ConsoleHandler, which will only
-# show messages at the INFO and above levels.
-handlers= java.util.logging.ConsoleHandler
-
-# To also add the FileHandler, use the following line instead.
-#handlers= java.util.logging.FileHandler, java.util.logging.ConsoleHandler
-
-# Default global logging level.
-# This specifies which kinds of events are logged across
-# all loggers.  For any given facility this global level
-# can be overriden by a facility specific level
-# Note that the ConsoleHandler also has a separate level
-# setting to limit messages printed to the console.
-.level= INFO
-
-############################################################
-# Handler specific properties.
-# Describes specific configuration info for Handlers.
-############################################################
-
-# default file output is in user's home directory.
-java.util.logging.FileHandler.pattern = %h/java%u.log
-java.util.logging.FileHandler.limit = 50000
-java.util.logging.FileHandler.count = 1
-# Default number of locks FileHandler can obtain synchronously.
-# This specifies maximum number of attempts to obtain lock file by FileHandler
-# implemented by incrementing the unique field %u as per FileHandler API documentation.
-java.util.logging.FileHandler.maxLocks = 100
-java.util.logging.FileHandler.formatter = java.util.logging.XMLFormatter
-
-# Limit the message that are printed on the console to INFO and above.
-java.util.logging.ConsoleHandler.level = INFO
-java.util.logging.ConsoleHandler.formatter = java.util.logging.SimpleFormatter
-
-# Example to customize the SimpleFormatter output format 
-# to print one-line log message like this:
-#     <level>: <log message> [<date/time>]
-#
-# java.util.logging.SimpleFormatter.format=%4$s: %5$s [%1$tc]%n
-
-############################################################
-# Facility specific properties.
-# Provides extra control for each logger.
-############################################################
-
-# For example, set the com.xyz.foo logger to only log SEVERE
-# messages:
-com.xyz.foo.level = SEVERE